Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Rab3c-203ENSMUST00000224180 967 ntBASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc40Q8BI79 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc40Q8BI79 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.36■□□□□ 0.53
Ccdc40Q8BI79 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc40Q8BI79 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Ccdc40Q8BI79 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc40Q8BI79 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ccdc40Q8BI79 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.36■□□□□ 0.53
Ccdc40Q8BI79 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.36■□□□□ 0.53
Ccdc40Q8BI79 Gm44549-201ENSMUST00000208351 577 ntBASIC18.36■□□□□ 0.53
Ccdc40Q8BI79 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc40Q8BI79 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc40Q8BI79 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ccdc40Q8BI79 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc40Q8BI79 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ccdc40Q8BI79 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc40Q8BI79 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Gm2399-201ENSMUST00000104944 225 ntBASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc40Q8BI79 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc40Q8BI79 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc40Q8BI79 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Ccdc40Q8BI79 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc40Q8BI79 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc40Q8BI79 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc40Q8BI79 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc40Q8BI79 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc40Q8BI79 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.33■□□□□ 0.52
Ccdc40Q8BI79 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.33■□□□□ 0.52
Ccdc40Q8BI79 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ccdc40Q8BI79 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc40Q8BI79 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ccdc40Q8BI79 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ccdc40Q8BI79 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc40Q8BI79 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc40Q8BI79 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ccdc40Q8BI79 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc40Q8BI79 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc40Q8BI79 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc40Q8BI79 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc40Q8BI79 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc40Q8BI79 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc40Q8BI79 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ccdc40Q8BI79 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc40Q8BI79 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ccdc40Q8BI79 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ccdc40Q8BI79 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc40Q8BI79 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc40Q8BI79 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc40Q8BI79 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms