Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnrc18Q80WC3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnrc18Q80WC3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnrc18Q80WC3 Gm13884-201ENSMUST00000118103 829 ntBASIC17.63■□□□□ 0.41
Tnrc18Q80WC3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.63■□□□□ 0.41
Tnrc18Q80WC3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.63■□□□□ 0.41
Tnrc18Q80WC3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Tnrc18Q80WC3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Tnrc18Q80WC3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Tnrc18Q80WC3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.62■□□□□ 0.41
Tnrc18Q80WC3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnrc18Q80WC3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Tnrc18Q80WC3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnrc18Q80WC3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.62■□□□□ 0.41
Tnrc18Q80WC3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Tnrc18Q80WC3 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.62■□□□□ 0.41
Tnrc18Q80WC3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.62■□□□□ 0.41
Tnrc18Q80WC3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.62■□□□□ 0.41
Tnrc18Q80WC3 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.62■□□□□ 0.41
Tnrc18Q80WC3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Tnrc18Q80WC3 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.62■□□□□ 0.41
Tnrc18Q80WC3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnrc18Q80WC3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnrc18Q80WC3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Tnrc18Q80WC3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnrc18Q80WC3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Gm10418-201ENSMUST00000100943 576 ntBASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnrc18Q80WC3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnrc18Q80WC3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Tnrc18Q80WC3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnrc18Q80WC3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnrc18Q80WC3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnrc18Q80WC3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tnrc18Q80WC3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Tnrc18Q80WC3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tnrc18Q80WC3 Gm2651-201ENSMUST00000203560 838 ntBASIC17.6■□□□□ 0.41
Tnrc18Q80WC3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnrc18Q80WC3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Tnrc18Q80WC3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnrc18Q80WC3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.6■□□□□ 0.41
Tnrc18Q80WC3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.6■□□□□ 0.41
Tnrc18Q80WC3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnrc18Q80WC3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.59■□□□□ 0.41
Tnrc18Q80WC3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc18Q80WC3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.59■□□□□ 0.41
Tnrc18Q80WC3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc18Q80WC3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc18Q80WC3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc18Q80WC3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc18Q80WC3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc18Q80WC3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc18Q80WC3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tnrc18Q80WC3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Tnrc18Q80WC3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnrc18Q80WC3 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.58■□□□□ 0.41
Tnrc18Q80WC3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Tnrc18Q80WC3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnrc18Q80WC3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tnrc18Q80WC3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnrc18Q80WC3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Tnrc18Q80WC3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnrc18Q80WC3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnrc18Q80WC3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnrc18Q80WC3 Gm18206-201ENSMUST00000207027 926 ntBASIC17.58■□□□□ 0.4
Tnrc18Q80WC3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnrc18Q80WC3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnrc18Q80WC3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
Tnrc18Q80WC3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Tnrc18Q80WC3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tnrc18Q80WC3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc18Q80WC3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc18Q80WC3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.57■□□□□ 0.4
Tnrc18Q80WC3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.57■□□□□ 0.4
Tnrc18Q80WC3 Gm37025-201ENSMUST00000195159 829 ntBASIC17.57■□□□□ 0.4
Tnrc18Q80WC3 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.57■□□□□ 0.4
Tnrc18Q80WC3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc18Q80WC3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc18Q80WC3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc18Q80WC3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.57■□□□□ 0.4
Tnrc18Q80WC3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc18Q80WC3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.57■□□□□ 0.4
Tnrc18Q80WC3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc18Q80WC3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnrc18Q80WC3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms