Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp38Q80UU2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp38Q80UU2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp38Q80UU2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp38Q80UU2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp38Q80UU2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp38Q80UU2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.62■□□□□ 0.41
Rpp38Q80UU2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Rpp38Q80UU2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp38Q80UU2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp38Q80UU2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp38Q80UU2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.62■□□□□ 0.41
Rpp38Q80UU2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp38Q80UU2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp38Q80UU2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.62■□□□□ 0.41
Rpp38Q80UU2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp38Q80UU2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp38Q80UU2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rpp38Q80UU2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp38Q80UU2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp38Q80UU2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp38Q80UU2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp38Q80UU2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rpp38Q80UU2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp38Q80UU2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp38Q80UU2 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.61■□□□□ 0.41
Rpp38Q80UU2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Rpp38Q80UU2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rpp38Q80UU2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp38Q80UU2 Gm12382-201ENSMUST00000122005 922 ntBASIC17.61■□□□□ 0.41
Rpp38Q80UU2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp38Q80UU2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp38Q80UU2 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.61■□□□□ 0.41
Rpp38Q80UU2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp38Q80UU2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp38Q80UU2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp38Q80UU2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp38Q80UU2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp38Q80UU2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp38Q80UU2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Gm13168-201ENSMUST00000121771 632 ntBASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp38Q80UU2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp38Q80UU2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.59■□□□□ 0.41
Rpp38Q80UU2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp38Q80UU2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp38Q80UU2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp38Q80UU2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.59■□□□□ 0.41
Rpp38Q80UU2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp38Q80UU2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.59■□□□□ 0.41
Rpp38Q80UU2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp38Q80UU2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp38Q80UU2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.59■□□□□ 0.41
Rpp38Q80UU2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.59■□□□□ 0.41
Rpp38Q80UU2 Gm8520-201ENSMUST00000186517 868 ntBASIC17.59■□□□□ 0.41
Rpp38Q80UU2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp38Q80UU2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp38Q80UU2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp38Q80UU2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp38Q80UU2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rpp38Q80UU2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rpp38Q80UU2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rpp38Q80UU2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rpp38Q80UU2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rpp38Q80UU2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rpp38Q80UU2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rpp38Q80UU2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rpp38Q80UU2 Gm4974-201ENSMUST00000209974 875 ntBASIC17.58■□□□□ 0.4
Rpp38Q80UU2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rpp38Q80UU2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rpp38Q80UU2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rpp38Q80UU2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Rpp38Q80UU2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp38Q80UU2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp38Q80UU2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rpp38Q80UU2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp38Q80UU2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.57■□□□□ 0.4
Rpp38Q80UU2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rpp38Q80UU2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp38Q80UU2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp38Q80UU2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Rpp38Q80UU2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp38Q80UU2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms