Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ctdp1Q7TSG2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctdp1Q7TSG2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ctdp1Q7TSG2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctdp1Q7TSG2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdp1Q7TSG2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdp1Q7TSG2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.23■□□□□ 0.67
Ctdp1Q7TSG2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.23■□□□□ 0.67
Ctdp1Q7TSG2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ctdp1Q7TSG2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdp1Q7TSG2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
Ctdp1Q7TSG2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdp1Q7TSG2 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.23■□□□□ 0.67
Ctdp1Q7TSG2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ctdp1Q7TSG2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdp1Q7TSG2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdp1Q7TSG2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ctdp1Q7TSG2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdp1Q7TSG2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdp1Q7TSG2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdp1Q7TSG2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdp1Q7TSG2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdp1Q7TSG2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Ctdp1Q7TSG2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ctdp1Q7TSG2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ctdp1Q7TSG2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctdp1Q7TSG2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctdp1Q7TSG2 Gm12933-201ENSMUST00000120203 872 ntBASIC19.19■□□□□ 0.66
Ctdp1Q7TSG2 Gm13534-201ENSMUST00000121169 513 ntBASIC19.19■□□□□ 0.66
Ctdp1Q7TSG2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctdp1Q7TSG2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctdp1Q7TSG2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctdp1Q7TSG2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ctdp1Q7TSG2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms