Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Rfx4Q7TNK1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx4Q7TNK1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.96■□□□□ 0.31
Rfx4Q7TNK1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Rfx4Q7TNK1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx4Q7TNK1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx4Q7TNK1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx4Q7TNK1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Rfx4Q7TNK1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx4Q7TNK1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.96■□□□□ 0.31
Rfx4Q7TNK1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx4Q7TNK1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rfx4Q7TNK1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.96■□□□□ 0.31
Rfx4Q7TNK1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx4Q7TNK1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx4Q7TNK1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.96■□□□□ 0.31
Rfx4Q7TNK1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx4Q7TNK1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx4Q7TNK1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.96■□□□□ 0.3
Rfx4Q7TNK1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx4Q7TNK1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx4Q7TNK1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx4Q7TNK1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx4Q7TNK1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx4Q7TNK1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rfx4Q7TNK1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.94■□□□□ 0.3
Rfx4Q7TNK1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx4Q7TNK1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx4Q7TNK1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx4Q7TNK1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx4Q7TNK1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx4Q7TNK1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx4Q7TNK1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx4Q7TNK1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx4Q7TNK1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.94■□□□□ 0.3
Rfx4Q7TNK1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx4Q7TNK1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx4Q7TNK1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Rfx4Q7TNK1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.93■□□□□ 0.3
Rfx4Q7TNK1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx4Q7TNK1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx4Q7TNK1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Rfx4Q7TNK1 Gm13146-201ENSMUST00000118508 780 ntBASIC16.93■□□□□ 0.3
Rfx4Q7TNK1 Gm26833-201ENSMUST00000180899 440 ntBASIC16.93■□□□□ 0.3
Rfx4Q7TNK1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.93■□□□□ 0.3
Rfx4Q7TNK1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx4Q7TNK1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx4Q7TNK1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx4Q7TNK1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx4Q7TNK1 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.93■□□□□ 0.3
Rfx4Q7TNK1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx4Q7TNK1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx4Q7TNK1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx4Q7TNK1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx4Q7TNK1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rfx4Q7TNK1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx4Q7TNK1 Gm13534-201ENSMUST00000121169 513 ntBASIC16.92■□□□□ 0.3
Rfx4Q7TNK1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rfx4Q7TNK1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx4Q7TNK1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.92■□□□□ 0.3
Rfx4Q7TNK1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms