Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Dhx40Q6PE54 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Dhx40Q6PE54 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dhx40Q6PE54 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Dhx40Q6PE54 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dhx40Q6PE54 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Dhx40Q6PE54 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dhx40Q6PE54 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Dhx40Q6PE54 AV356131-201ENSMUST00000206201 750 ntBASIC19.61■□□□□ 0.73
Dhx40Q6PE54 Gm7514-201ENSMUST00000209475 934 ntBASIC19.61■□□□□ 0.73
Dhx40Q6PE54 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Dhx40Q6PE54 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dhx40Q6PE54 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.61■□□□□ 0.73
Dhx40Q6PE54 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.61■□□□□ 0.73
Dhx40Q6PE54 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Dhx40Q6PE54 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dhx40Q6PE54 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Dhx40Q6PE54 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dhx40Q6PE54 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Dhx40Q6PE54 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 Mir8112-201ENSMUST00000184382 131 ntBASIC19.6■□□□□ 0.73
Dhx40Q6PE54 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Dhx40Q6PE54 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.59■□□□□ 0.73
Dhx40Q6PE54 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Dhx40Q6PE54 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Dhx40Q6PE54 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Dhx40Q6PE54 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Dhx40Q6PE54 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Dhx40Q6PE54 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Dhx40Q6PE54 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Dhx40Q6PE54 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Dhx40Q6PE54 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Dhx40Q6PE54 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Dhx40Q6PE54 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Dhx40Q6PE54 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Dhx40Q6PE54 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Dhx40Q6PE54 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Dhx40Q6PE54 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Dhx40Q6PE54 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Dhx40Q6PE54 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Dhx40Q6PE54 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.58■□□□□ 0.72
Dhx40Q6PE54 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Dhx40Q6PE54 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.56■□□□□ 0.72
Dhx40Q6PE54 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Haglr-201ENSMUST00000100000 2085 ntBASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Dhx40Q6PE54 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Dhx40Q6PE54 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Dhx40Q6PE54 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Dhx40Q6PE54 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Dhx40Q6PE54 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Dhx40Q6PE54 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Dhx40Q6PE54 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms