Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chd4Q6PDQ2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Chd4Q6PDQ2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chd4Q6PDQ2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
Chd4Q6PDQ2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Chd4Q6PDQ2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Chd4Q6PDQ2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Chd4Q6PDQ2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Chd4Q6PDQ2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC23.16■■□□□ 1.3
Chd4Q6PDQ2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Chd4Q6PDQ2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Chd4Q6PDQ2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Chd4Q6PDQ2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Chd4Q6PDQ2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Chd4Q6PDQ2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chd4Q6PDQ2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chd4Q6PDQ2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chd4Q6PDQ2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Chd4Q6PDQ2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Chd4Q6PDQ2 Gm29518-201ENSMUST00000190858 372 ntBASIC23.15■■□□□ 1.3
Chd4Q6PDQ2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Chd4Q6PDQ2 Gm7213-201ENSMUST00000215977 950 ntBASIC23.15■■□□□ 1.3
Chd4Q6PDQ2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Chd4Q6PDQ2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chd4Q6PDQ2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chd4Q6PDQ2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC23.14■■□□□ 1.3
Chd4Q6PDQ2 Gm14464-201ENSMUST00000119658 1254 ntBASIC23.14■■□□□ 1.3
Chd4Q6PDQ2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Chd4Q6PDQ2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Chd4Q6PDQ2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Chd4Q6PDQ2 Actl10-202ENSMUST00000226583 1501 ntBASIC23.14■■□□□ 1.3
Chd4Q6PDQ2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Chd4Q6PDQ2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Chd4Q6PDQ2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Chd4Q6PDQ2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Chd4Q6PDQ2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Chd4Q6PDQ2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Chd4Q6PDQ2 Gm8258-201ENSMUST00000055593 1449 ntBASIC23.14■■□□□ 1.29
Chd4Q6PDQ2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Chd4Q6PDQ2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chd4Q6PDQ2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chd4Q6PDQ2 Gm19721-201ENSMUST00000195284 1764 ntBASIC23.13■■□□□ 1.29
Chd4Q6PDQ2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chd4Q6PDQ2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Chd4Q6PDQ2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC23.13■■□□□ 1.29
Chd4Q6PDQ2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Chd4Q6PDQ2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC23.13■■□□□ 1.29
Chd4Q6PDQ2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chd4Q6PDQ2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chd4Q6PDQ2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chd4Q6PDQ2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd4Q6PDQ2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd4Q6PDQ2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd4Q6PDQ2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd4Q6PDQ2 Gm45141-201ENSMUST00000206502 1888 ntBASIC23.12■■□□□ 1.29
Chd4Q6PDQ2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd4Q6PDQ2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd4Q6PDQ2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Chd4Q6PDQ2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd4Q6PDQ2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Chd4Q6PDQ2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd4Q6PDQ2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Chd4Q6PDQ2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd4Q6PDQ2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC23.12■■□□□ 1.29
Chd4Q6PDQ2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chd4Q6PDQ2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Chd4Q6PDQ2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chd4Q6PDQ2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chd4Q6PDQ2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Chd4Q6PDQ2 Gm27704-201ENSMUST00000185094 107 ntBASIC23.11■■□□□ 1.29
Chd4Q6PDQ2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Chd4Q6PDQ2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC23.11■■□□□ 1.29
Chd4Q6PDQ2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chd4Q6PDQ2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Chd4Q6PDQ2 Gm28033-201ENSMUST00000184224 96 ntBASIC23.1■■□□□ 1.29
Chd4Q6PDQ2 Gm21559-201ENSMUST00000220638 855 ntBASIC23.1■■□□□ 1.29
Chd4Q6PDQ2 Gm8587-201ENSMUST00000076538 843 ntBASIC23.1■■□□□ 1.29
Chd4Q6PDQ2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Chd4Q6PDQ2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
Chd4Q6PDQ2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Chd4Q6PDQ2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Chd4Q6PDQ2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Chd4Q6PDQ2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Chd4Q6PDQ2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
Chd4Q6PDQ2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Chd4Q6PDQ2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Chd4Q6PDQ2 Gm25016-201ENSMUST00000158399 131 ntBASIC23.1■■□□□ 1.29
Chd4Q6PDQ2 Gm17808-201ENSMUST00000200859 894 ntBASIC23.1■■□□□ 1.29
Chd4Q6PDQ2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Chd4Q6PDQ2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Chd4Q6PDQ2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Chd4Q6PDQ2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC23.09■■□□□ 1.29
Chd4Q6PDQ2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Chd4Q6PDQ2 Gm14859-201ENSMUST00000117752 357 ntBASIC23.09■■□□□ 1.29
Chd4Q6PDQ2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Chd4Q6PDQ2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Chd4Q6PDQ2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Chd4Q6PDQ2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Chd4Q6PDQ2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Chd4Q6PDQ2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms