Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
Abcf1Q6P542 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abcf1Q6P542 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Abcf1Q6P542 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Abcf1Q6P542 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Abcf1Q6P542 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Abcf1Q6P542 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Abcf1Q6P542 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Abcf1Q6P542 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Abcf1Q6P542 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Abcf1Q6P542 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Abcf1Q6P542 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Abcf1Q6P542 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.76■□□□□ 0.75
Abcf1Q6P542 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Abcf1Q6P542 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Abcf1Q6P542 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Abcf1Q6P542 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Abcf1Q6P542 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Abcf1Q6P542 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Abcf1Q6P542 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Abcf1Q6P542 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.76■□□□□ 0.75
Abcf1Q6P542 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.76■□□□□ 0.75
Abcf1Q6P542 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Abcf1Q6P542 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.76■□□□□ 0.75
Abcf1Q6P542 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Abcf1Q6P542 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Abcf1Q6P542 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abcf1Q6P542 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abcf1Q6P542 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abcf1Q6P542 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abcf1Q6P542 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Abcf1Q6P542 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.75■□□□□ 0.75
Abcf1Q6P542 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abcf1Q6P542 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Abcf1Q6P542 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Abcf1Q6P542 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abcf1Q6P542 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abcf1Q6P542 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Abcf1Q6P542 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abcf1Q6P542 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abcf1Q6P542 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abcf1Q6P542 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abcf1Q6P542 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.74■□□□□ 0.75
Abcf1Q6P542 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abcf1Q6P542 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abcf1Q6P542 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abcf1Q6P542 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abcf1Q6P542 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abcf1Q6P542 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abcf1Q6P542 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abcf1Q6P542 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.73■□□□□ 0.75
Abcf1Q6P542 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcf1Q6P542 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.73■□□□□ 0.75
Abcf1Q6P542 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcf1Q6P542 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcf1Q6P542 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcf1Q6P542 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcf1Q6P542 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcf1Q6P542 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcf1Q6P542 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.73■□□□□ 0.75
Abcf1Q6P542 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.73■□□□□ 0.75
Abcf1Q6P542 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.73■□□□□ 0.75
Abcf1Q6P542 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcf1Q6P542 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcf1Q6P542 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcf1Q6P542 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.73■□□□□ 0.75
Abcf1Q6P542 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcf1Q6P542 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Abcf1Q6P542 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Abcf1Q6P542 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Abcf1Q6P542 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Abcf1Q6P542 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.72■□□□□ 0.75
Abcf1Q6P542 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Abcf1Q6P542 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Abcf1Q6P542 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Abcf1Q6P542 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.72■□□□□ 0.75
Abcf1Q6P542 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.72■□□□□ 0.75
Abcf1Q6P542 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Abcf1Q6P542 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Abcf1Q6P542 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Abcf1Q6P542 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Abcf1Q6P542 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Abcf1Q6P542 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Abcf1Q6P542 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Abcf1Q6P542 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Abcf1Q6P542 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Abcf1Q6P542 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.71■□□□□ 0.75
Abcf1Q6P542 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Abcf1Q6P542 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Abcf1Q6P542 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Abcf1Q6P542 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.71■□□□□ 0.75
Abcf1Q6P542 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Abcf1Q6P542 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.71■□□□□ 0.75
Abcf1Q6P542 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Abcf1Q6P542 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Abcf1Q6P542 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Abcf1Q6P542 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abcf1Q6P542 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Abcf1Q6P542 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abcf1Q6P542 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms