Protein–RNA interactions for Protein: Q6IUP1

Sohlh1, Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sohlh1Q6IUP1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sohlh1Q6IUP1 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.17■□□□□ 0.34
Sohlh1Q6IUP1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sohlh1Q6IUP1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sohlh1Q6IUP1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Gm2274-201ENSMUST00000184539 609 ntBASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Gm45058-201ENSMUST00000205810 766 ntBASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sohlh1Q6IUP1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sohlh1Q6IUP1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sohlh1Q6IUP1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sohlh1Q6IUP1 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.14■□□□□ 0.33
Sohlh1Q6IUP1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Sohlh1Q6IUP1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sohlh1Q6IUP1 Gm24841-201ENSMUST00000158676 357 ntBASIC17.14■□□□□ 0.33
Sohlh1Q6IUP1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sohlh1Q6IUP1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sohlh1Q6IUP1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sohlh1Q6IUP1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sohlh1Q6IUP1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sohlh1Q6IUP1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sohlh1Q6IUP1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sohlh1Q6IUP1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sohlh1Q6IUP1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sohlh1Q6IUP1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sohlh1Q6IUP1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sohlh1Q6IUP1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sohlh1Q6IUP1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sohlh1Q6IUP1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Sohlh1Q6IUP1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Sohlh1Q6IUP1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.13■□□□□ 0.33
Sohlh1Q6IUP1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sohlh1Q6IUP1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sohlh1Q6IUP1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sohlh1Q6IUP1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.13■□□□□ 0.33
Sohlh1Q6IUP1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sohlh1Q6IUP1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sohlh1Q6IUP1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sohlh1Q6IUP1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.11■□□□□ 0.33
Sohlh1Q6IUP1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sohlh1Q6IUP1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sohlh1Q6IUP1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sohlh1Q6IUP1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sohlh1Q6IUP1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms