Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Scube3Q66PY1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scube3Q66PY1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scube3Q66PY1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scube3Q66PY1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scube3Q66PY1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scube3Q66PY1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Scube3Q66PY1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scube3Q66PY1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scube3Q66PY1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scube3Q66PY1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.51■□□□□ 0.55
Scube3Q66PY1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scube3Q66PY1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scube3Q66PY1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scube3Q66PY1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scube3Q66PY1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scube3Q66PY1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scube3Q66PY1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scube3Q66PY1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scube3Q66PY1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scube3Q66PY1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scube3Q66PY1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Scube3Q66PY1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scube3Q66PY1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scube3Q66PY1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scube3Q66PY1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scube3Q66PY1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scube3Q66PY1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.49■□□□□ 0.55
Scube3Q66PY1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scube3Q66PY1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.49■□□□□ 0.55
Scube3Q66PY1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Scube3Q66PY1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Scube3Q66PY1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scube3Q66PY1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scube3Q66PY1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scube3Q66PY1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scube3Q66PY1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scube3Q66PY1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scube3Q66PY1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scube3Q66PY1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scube3Q66PY1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scube3Q66PY1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scube3Q66PY1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Scube3Q66PY1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scube3Q66PY1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scube3Q66PY1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scube3Q66PY1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scube3Q66PY1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scube3Q66PY1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.48■□□□□ 0.55
Scube3Q66PY1 Gm10517-202ENSMUST00000192970 758 ntBASIC18.48■□□□□ 0.55
Scube3Q66PY1 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.48■□□□□ 0.55
Scube3Q66PY1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scube3Q66PY1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scube3Q66PY1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scube3Q66PY1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scube3Q66PY1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Scube3Q66PY1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scube3Q66PY1 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.48■□□□□ 0.55
Scube3Q66PY1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube3Q66PY1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube3Q66PY1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube3Q66PY1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube3Q66PY1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Scube3Q66PY1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube3Q66PY1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Scube3Q66PY1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
Scube3Q66PY1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube3Q66PY1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.47■□□□□ 0.55
Scube3Q66PY1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scube3Q66PY1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube3Q66PY1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scube3Q66PY1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scube3Q66PY1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube3Q66PY1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scube3Q66PY1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scube3Q66PY1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scube3Q66PY1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scube3Q66PY1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scube3Q66PY1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.46■□□□□ 0.55
Scube3Q66PY1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scube3Q66PY1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scube3Q66PY1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms