Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.48■■□□□ 1.03
Col11a2Q64739 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col11a2Q64739 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col11a2Q64739 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col11a2Q64739 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC21.48■■□□□ 1.03
Col11a2Q64739 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col11a2Q64739 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col11a2Q64739 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.48■■□□□ 1.03
Col11a2Q64739 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Col11a2Q64739 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col11a2Q64739 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC21.47■■□□□ 1.03
Col11a2Q64739 Gm5864-201ENSMUST00000202263 970 ntBASIC21.47■■□□□ 1.03
Col11a2Q64739 AC125350.1-201ENSMUST00000225115 903 ntBASIC21.47■■□□□ 1.03
Col11a2Q64739 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col11a2Q64739 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col11a2Q64739 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Col11a2Q64739 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col11a2Q64739 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.47■■□□□ 1.03
Col11a2Q64739 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col11a2Q64739 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Col11a2Q64739 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Col11a2Q64739 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col11a2Q64739 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col11a2Q64739 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Col11a2Q64739 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Col11a2Q64739 Gm43347-201ENSMUST00000200226 580 ntBASIC21.46■■□□□ 1.03
Col11a2Q64739 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col11a2Q64739 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col11a2Q64739 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col11a2Q64739 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col11a2Q64739 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Col11a2Q64739 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col11a2Q64739 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Col11a2Q64739 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC21.46■■□□□ 1.03
Col11a2Q64739 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col11a2Q64739 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col11a2Q64739 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col11a2Q64739 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col11a2Q64739 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Col11a2Q64739 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC21.45■■□□□ 1.02
Col11a2Q64739 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Col11a2Q64739 AC153889.1-201ENSMUST00000219257 330 ntBASIC21.45■■□□□ 1.02
Col11a2Q64739 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col11a2Q64739 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.45■■□□□ 1.02
Col11a2Q64739 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col11a2Q64739 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.45■■□□□ 1.02
Col11a2Q64739 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col11a2Q64739 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col11a2Q64739 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col11a2Q64739 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.44■■□□□ 1.02
Col11a2Q64739 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Col11a2Q64739 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Col11a2Q64739 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC21.44■■□□□ 1.02
Col11a2Q64739 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC21.44■■□□□ 1.02
Col11a2Q64739 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC21.44■■□□□ 1.02
Col11a2Q64739 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col11a2Q64739 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col11a2Q64739 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.44■■□□□ 1.02
Col11a2Q64739 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.44■■□□□ 1.02
Col11a2Q64739 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Col11a2Q64739 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col11a2Q64739 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Col11a2Q64739 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Col11a2Q64739 Ighv6-1-201ENSMUST00000193612 343 ntBASIC21.43■■□□□ 1.02
Col11a2Q64739 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Col11a2Q64739 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Col11a2Q64739 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.43■■□□□ 1.02
Col11a2Q64739 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col11a2Q64739 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col11a2Q64739 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
Col11a2Q64739 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col11a2Q64739 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.43■■□□□ 1.02
Col11a2Q64739 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col11a2Q64739 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Col11a2Q64739 BC021767-201ENSMUST00000126387 1716 ntBASIC21.43■■□□□ 1.02
Col11a2Q64739 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col11a2Q64739 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col11a2Q64739 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col11a2Q64739 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.42■■□□□ 1.02
Col11a2Q64739 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col11a2Q64739 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Col11a2Q64739 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.42■■□□□ 1.02
Col11a2Q64739 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.42■■□□□ 1.02
Col11a2Q64739 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col11a2Q64739 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col11a2Q64739 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Col11a2Q64739 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC21.42■■□□□ 1.02
Col11a2Q64739 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Col11a2Q64739 AC159301.1-201ENSMUST00000225130 1182 ntBASIC21.42■■□□□ 1.02
Col11a2Q64739 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC21.42■■□□□ 1.02
Col11a2Q64739 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col11a2Q64739 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col11a2Q64739 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col11a2Q64739 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col11a2Q64739 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col11a2Q64739 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col11a2Q64739 Gm18733-201ENSMUST00000173950 856 ntBASIC21.41■■□□□ 1.02
Col11a2Q64739 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Col11a2Q64739 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Col11a2Q64739 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms