Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Commd3Q63829 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Commd3Q63829 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Commd3Q63829 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Commd3Q63829 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Commd3Q63829 Golgb1-201ENSMUST00000023534 498 ntBASIC14.75□□□□□ -0.05
Commd3Q63829 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Commd3Q63829 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Commd3Q63829 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Commd3Q63829 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Commd3Q63829 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Commd3Q63829 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Commd3Q63829 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Commd3Q63829 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Commd3Q63829 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Commd3Q63829 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Commd3Q63829 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Commd3Q63829 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Commd3Q63829 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Commd3Q63829 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Commd3Q63829 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Commd3Q63829 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Commd3Q63829 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.74□□□□□ -0.05
Commd3Q63829 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.74□□□□□ -0.05
Commd3Q63829 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.74□□□□□ -0.05
Commd3Q63829 Spcs1-204ENSMUST00000226782 949 ntBASIC14.74□□□□□ -0.05
Commd3Q63829 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.74□□□□□ -0.05
Commd3Q63829 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Commd3Q63829 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Commd3Q63829 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Commd3Q63829 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Commd3Q63829 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Commd3Q63829 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Commd3Q63829 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Commd3Q63829 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Commd3Q63829 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Commd3Q63829 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.73□□□□□ -0.05
Commd3Q63829 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Commd3Q63829 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Commd3Q63829 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Commd3Q63829 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Commd3Q63829 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Commd3Q63829 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Commd3Q63829 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.73□□□□□ -0.05
Commd3Q63829 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Commd3Q63829 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Commd3Q63829 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Commd3Q63829 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.73□□□□□ -0.05
Commd3Q63829 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Commd3Q63829 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Commd3Q63829 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Commd3Q63829 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Commd3Q63829 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Commd3Q63829 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Commd3Q63829 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Commd3Q63829 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Commd3Q63829 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Commd3Q63829 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Commd3Q63829 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Commd3Q63829 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.72□□□□□ -0.05
Commd3Q63829 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.72□□□□□ -0.05
Commd3Q63829 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Commd3Q63829 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.72□□□□□ -0.05
Commd3Q63829 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.72□□□□□ -0.05
Commd3Q63829 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Commd3Q63829 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Commd3Q63829 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Commd3Q63829 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Commd3Q63829 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.72□□□□□ -0.05
Commd3Q63829 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.72□□□□□ -0.05
Commd3Q63829 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Commd3Q63829 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Commd3Q63829 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Commd3Q63829 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Commd3Q63829 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
Commd3Q63829 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Commd3Q63829 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Commd3Q63829 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Commd3Q63829 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Commd3Q63829 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Commd3Q63829 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Commd3Q63829 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.71□□□□□ -0.05
Commd3Q63829 Gm15546-201ENSMUST00000122095 826 ntBASIC14.71□□□□□ -0.05
Commd3Q63829 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.71□□□□□ -0.05
Commd3Q63829 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.71□□□□□ -0.05
Commd3Q63829 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.71□□□□□ -0.05
Commd3Q63829 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.71□□□□□ -0.05
Commd3Q63829 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Commd3Q63829 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Commd3Q63829 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.71□□□□□ -0.05
Commd3Q63829 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Commd3Q63829 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Commd3Q63829 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.71□□□□□ -0.05
Commd3Q63829 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Commd3Q63829 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Commd3Q63829 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms