Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ctr9Q62018 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ctr9Q62018 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ctr9Q62018 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ctr9Q62018 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ctr9Q62018 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ctr9Q62018 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ctr9Q62018 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ctr9Q62018 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctr9Q62018 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctr9Q62018 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctr9Q62018 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctr9Q62018 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Ctr9Q62018 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctr9Q62018 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ctr9Q62018 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctr9Q62018 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.77■□□□□ 0.92
Ctr9Q62018 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctr9Q62018 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctr9Q62018 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctr9Q62018 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctr9Q62018 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.77■□□□□ 0.91
Ctr9Q62018 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ctr9Q62018 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ctr9Q62018 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Ctr9Q62018 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ctr9Q62018 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ctr9Q62018 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ctr9Q62018 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.76■□□□□ 0.91
Ctr9Q62018 Gm10418-201ENSMUST00000100943 576 ntBASIC20.76■□□□□ 0.91
Ctr9Q62018 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.76■□□□□ 0.91
Ctr9Q62018 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Ctr9Q62018 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ctr9Q62018 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.76■□□□□ 0.91
Ctr9Q62018 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ctr9Q62018 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ctr9Q62018 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ctr9Q62018 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ctr9Q62018 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctr9Q62018 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctr9Q62018 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ctr9Q62018 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctr9Q62018 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctr9Q62018 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ctr9Q62018 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Ctr9Q62018 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ctr9Q62018 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctr9Q62018 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctr9Q62018 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctr9Q62018 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.75■□□□□ 0.91
Ctr9Q62018 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctr9Q62018 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctr9Q62018 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ctr9Q62018 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ctr9Q62018 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.74■□□□□ 0.91
Ctr9Q62018 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.74■□□□□ 0.91
Ctr9Q62018 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctr9Q62018 Gm12085-201ENSMUST00000119263 940 ntBASIC20.74■□□□□ 0.91
Ctr9Q62018 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.74■□□□□ 0.91
Ctr9Q62018 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ctr9Q62018 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ctr9Q62018 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctr9Q62018 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctr9Q62018 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.74■□□□□ 0.91
Ctr9Q62018 Gm4974-201ENSMUST00000209974 875 ntBASIC20.74■□□□□ 0.91
Ctr9Q62018 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.74■□□□□ 0.91
Ctr9Q62018 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctr9Q62018 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctr9Q62018 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ctr9Q62018 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctr9Q62018 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctr9Q62018 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctr9Q62018 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.74■□□□□ 0.91
Ctr9Q62018 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctr9Q62018 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctr9Q62018 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Ctr9Q62018 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
Ctr9Q62018 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.73■□□□□ 0.91
Ctr9Q62018 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.73■□□□□ 0.91
Ctr9Q62018 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ctr9Q62018 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctr9Q62018 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctr9Q62018 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctr9Q62018 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctr9Q62018 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctr9Q62018 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctr9Q62018 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctr9Q62018 Idnk-204ENSMUST00000226010 1898 ntBASIC20.73■□□□□ 0.91
Ctr9Q62018 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Ctr9Q62018 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctr9Q62018 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctr9Q62018 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Ctr9Q62018 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctr9Q62018 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctr9Q62018 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctr9Q62018 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.72■□□□□ 0.91
Ctr9Q62018 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctr9Q62018 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.72■□□□□ 0.91
Ctr9Q62018 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ctr9Q62018 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms