Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Itm2aQ61500 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Itm2aQ61500 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.37■□□□□ 0.37
Itm2aQ61500 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Itm2aQ61500 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.37■□□□□ 0.37
Itm2aQ61500 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Itm2aQ61500 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Itm2aQ61500 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Itm2aQ61500 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Itm2aQ61500 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Itm2aQ61500 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Itm2aQ61500 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Itm2aQ61500 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Itm2aQ61500 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Itm2aQ61500 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Itm2aQ61500 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Itm2aQ61500 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Itm2aQ61500 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Itm2aQ61500 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.36■□□□□ 0.37
Itm2aQ61500 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Itm2aQ61500 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Itm2aQ61500 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Itm2aQ61500 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.36■□□□□ 0.37
Itm2aQ61500 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Itm2aQ61500 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Itm2aQ61500 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Itm2aQ61500 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Itm2aQ61500 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Itm2aQ61500 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Itm2aQ61500 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Itm2aQ61500 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Itm2aQ61500 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Itm2aQ61500 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Itm2aQ61500 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.35■□□□□ 0.37
Itm2aQ61500 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.35■□□□□ 0.37
Itm2aQ61500 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Itm2aQ61500 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.35■□□□□ 0.37
Itm2aQ61500 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Itm2aQ61500 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
Itm2aQ61500 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.35■□□□□ 0.37
Itm2aQ61500 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Itm2aQ61500 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Itm2aQ61500 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.34■□□□□ 0.37
Itm2aQ61500 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Itm2aQ61500 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Itm2aQ61500 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.34■□□□□ 0.37
Itm2aQ61500 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Itm2aQ61500 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Itm2aQ61500 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Itm2aQ61500 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.34■□□□□ 0.37
Itm2aQ61500 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Itm2aQ61500 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Itm2aQ61500 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Itm2aQ61500 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Itm2aQ61500 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Itm2aQ61500 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Itm2aQ61500 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Itm2aQ61500 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Itm2aQ61500 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Itm2aQ61500 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Itm2aQ61500 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Itm2aQ61500 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Itm2aQ61500 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Itm2aQ61500 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.33■□□□□ 0.36
Itm2aQ61500 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.33■□□□□ 0.36
Itm2aQ61500 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Itm2aQ61500 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.33■□□□□ 0.36
Itm2aQ61500 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.33■□□□□ 0.36
Itm2aQ61500 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Itm2aQ61500 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Itm2aQ61500 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Itm2aQ61500 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Itm2aQ61500 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Itm2aQ61500 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Itm2aQ61500 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Itm2aQ61500 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Itm2aQ61500 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
Itm2aQ61500 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Itm2aQ61500 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Itm2aQ61500 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Itm2aQ61500 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Itm2aQ61500 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Itm2aQ61500 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms