Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.5■□□□□ 0.39
Col12a1Q60847 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col12a1Q60847 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.49■□□□□ 0.39
Col12a1Q60847 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col12a1Q60847 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Col12a1Q60847 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Col12a1Q60847 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col12a1Q60847 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.49■□□□□ 0.39
Col12a1Q60847 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col12a1Q60847 Rps4l-201ENSMUST00000071745 943 ntBASIC17.49■□□□□ 0.39
Col12a1Q60847 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Col12a1Q60847 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col12a1Q60847 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col12a1Q60847 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col12a1Q60847 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col12a1Q60847 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col12a1Q60847 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col12a1Q60847 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col12a1Q60847 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col12a1Q60847 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.49■□□□□ 0.39
Col12a1Q60847 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col12a1Q60847 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.48■□□□□ 0.39
Col12a1Q60847 Gm27702-201ENSMUST00000184512 56 ntBASIC17.48■□□□□ 0.39
Col12a1Q60847 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col12a1Q60847 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col12a1Q60847 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col12a1Q60847 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.48■□□□□ 0.39
Col12a1Q60847 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.48■□□□□ 0.39
Col12a1Q60847 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col12a1Q60847 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Col12a1Q60847 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col12a1Q60847 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col12a1Q60847 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col12a1Q60847 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col12a1Q60847 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col12a1Q60847 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col12a1Q60847 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col12a1Q60847 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col12a1Q60847 Gm23935-201ENSMUST00000102303 57 ntBASIC17.47■□□□□ 0.39
Col12a1Q60847 Gm24270-201ENSMUST00000102326 57 ntBASIC17.47■□□□□ 0.39
Col12a1Q60847 Gm24245-201ENSMUST00000157318 57 ntBASIC17.47■□□□□ 0.39
Col12a1Q60847 Gm37722-201ENSMUST00000193757 208 ntBASIC17.47■□□□□ 0.39
Col12a1Q60847 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col12a1Q60847 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col12a1Q60847 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.47■□□□□ 0.39
Col12a1Q60847 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col12a1Q60847 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col12a1Q60847 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Col12a1Q60847 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col12a1Q60847 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Col12a1Q60847 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col12a1Q60847 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col12a1Q60847 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col12a1Q60847 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Col12a1Q60847 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col12a1Q60847 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.47■□□□□ 0.39
Col12a1Q60847 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col12a1Q60847 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col12a1Q60847 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col12a1Q60847 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col12a1Q60847 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.46■□□□□ 0.39
Col12a1Q60847 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.46■□□□□ 0.39
Col12a1Q60847 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col12a1Q60847 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col12a1Q60847 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col12a1Q60847 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Col12a1Q60847 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col12a1Q60847 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col12a1Q60847 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Col12a1Q60847 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.46■□□□□ 0.39
Col12a1Q60847 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.46■□□□□ 0.39
Col12a1Q60847 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Col12a1Q60847 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col12a1Q60847 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Col12a1Q60847 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col12a1Q60847 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col12a1Q60847 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col12a1Q60847 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col12a1Q60847 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col12a1Q60847 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col12a1Q60847 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col12a1Q60847 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col12a1Q60847 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col12a1Q60847 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col12a1Q60847 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Col12a1Q60847 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col12a1Q60847 Gm1401-201ENSMUST00000122048 772 ntBASIC17.45■□□□□ 0.38
Col12a1Q60847 Gm10052-201ENSMUST00000168019 960 ntBASIC17.45■□□□□ 0.38
Col12a1Q60847 Gm5264-201ENSMUST00000190584 848 ntBASIC17.45■□□□□ 0.38
Col12a1Q60847 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.45■□□□□ 0.38
Col12a1Q60847 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col12a1Q60847 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col12a1Q60847 Gm7729-201ENSMUST00000050143 801 ntBASIC17.45■□□□□ 0.38
Col12a1Q60847 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Col12a1Q60847 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Col12a1Q60847 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Col12a1Q60847 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col12a1Q60847 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col12a1Q60847 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col12a1Q60847 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms