Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm1Q60636 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm1Q60636 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm1Q60636 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prdm1Q60636 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.61■□□□□ 0.89
Prdm1Q60636 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm1Q60636 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
Prdm1Q60636 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm1Q60636 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Prdm1Q60636 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm1Q60636 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm1Q60636 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Prdm1Q60636 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm1Q60636 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm1Q60636 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.6■□□□□ 0.89
Prdm1Q60636 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Prdm1Q60636 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Prdm1Q60636 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.6■□□□□ 0.89
Prdm1Q60636 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm1Q60636 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm1Q60636 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm1Q60636 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm1Q60636 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm1Q60636 Gm11643-201ENSMUST00000119578 864 ntBASIC20.59■□□□□ 0.89
Prdm1Q60636 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.59■□□□□ 0.89
Prdm1Q60636 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm1Q60636 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm1Q60636 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.59■□□□□ 0.89
Prdm1Q60636 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm1Q60636 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.59■□□□□ 0.89
Prdm1Q60636 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm1Q60636 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prdm1Q60636 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prdm1Q60636 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prdm1Q60636 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Prdm1Q60636 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.58■□□□□ 0.89
Prdm1Q60636 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prdm1Q60636 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.58■□□□□ 0.89
Prdm1Q60636 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prdm1Q60636 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.58■□□□□ 0.89
Prdm1Q60636 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prdm1Q60636 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.58■□□□□ 0.89
Prdm1Q60636 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Prdm1Q60636 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.58■□□□□ 0.89
Prdm1Q60636 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prdm1Q60636 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prdm1Q60636 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.58■□□□□ 0.88
Prdm1Q60636 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prdm1Q60636 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prdm1Q60636 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prdm1Q60636 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prdm1Q60636 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prdm1Q60636 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Prdm1Q60636 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.57■□□□□ 0.88
Prdm1Q60636 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm1Q60636 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm1Q60636 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm1Q60636 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm1Q60636 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Prdm1Q60636 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Prdm1Q60636 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm1Q60636 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm1Q60636 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm1Q60636 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm1Q60636 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.57■□□□□ 0.88
Prdm1Q60636 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm1Q60636 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm1Q60636 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm1Q60636 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.56■□□□□ 0.88
Prdm1Q60636 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm1Q60636 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.56■□□□□ 0.88
Prdm1Q60636 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm1Q60636 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm1Q60636 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Prdm1Q60636 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm1Q60636 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm1Q60636 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm1Q60636 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm1Q60636 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm1Q60636 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Prdm1Q60636 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm1Q60636 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm1Q60636 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Prdm1Q60636 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.55■□□□□ 0.88
Prdm1Q60636 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Prdm1Q60636 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm1Q60636 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Prdm1Q60636 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm1Q60636 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm1Q60636 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Prdm1Q60636 Gm10517-202ENSMUST00000192970 758 ntBASIC20.55■□□□□ 0.88
Prdm1Q60636 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm1Q60636 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm1Q60636 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm1Q60636 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm1Q60636 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm1Q60636 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.54■□□□□ 0.88
Prdm1Q60636 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.54■□□□□ 0.88
Prdm1Q60636 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm1Q60636 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms