Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cacna2d4Q5RJF7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna2d4Q5RJF7 Gm13168-201ENSMUST00000121771 632 ntBASIC19.66■□□□□ 0.74
Cacna2d4Q5RJF7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna2d4Q5RJF7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Cacna2d4Q5RJF7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna2d4Q5RJF7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna2d4Q5RJF7 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.66■□□□□ 0.74
Cacna2d4Q5RJF7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cacna2d4Q5RJF7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna2d4Q5RJF7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.65■□□□□ 0.74
Cacna2d4Q5RJF7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna2d4Q5RJF7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.65■□□□□ 0.74
Cacna2d4Q5RJF7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Cacna2d4Q5RJF7 Gm15375-201ENSMUST00000119510 849 ntBASIC19.65■□□□□ 0.74
Cacna2d4Q5RJF7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna2d4Q5RJF7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna2d4Q5RJF7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Cacna2d4Q5RJF7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna2d4Q5RJF7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna2d4Q5RJF7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna2d4Q5RJF7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.65■□□□□ 0.74
Cacna2d4Q5RJF7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna2d4Q5RJF7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Cacna2d4Q5RJF7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cacna2d4Q5RJF7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cacna2d4Q5RJF7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cacna2d4Q5RJF7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cacna2d4Q5RJF7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.64■□□□□ 0.73
Cacna2d4Q5RJF7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.64■□□□□ 0.73
Cacna2d4Q5RJF7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Cacna2d4Q5RJF7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna2d4Q5RJF7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Cacna2d4Q5RJF7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.64■□□□□ 0.73
Cacna2d4Q5RJF7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna2d4Q5RJF7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cacna2d4Q5RJF7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Gm5643-201ENSMUST00000117081 966 ntBASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Mir6349-201ENSMUST00000184059 97 ntBASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Gm8520-201ENSMUST00000186517 868 ntBASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cacna2d4Q5RJF7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna2d4Q5RJF7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna2d4Q5RJF7 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.62■□□□□ 0.73
Cacna2d4Q5RJF7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna2d4Q5RJF7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna2d4Q5RJF7 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.62■□□□□ 0.73
Cacna2d4Q5RJF7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna2d4Q5RJF7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.62■□□□□ 0.73
Cacna2d4Q5RJF7 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.62■□□□□ 0.73
Cacna2d4Q5RJF7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.62■□□□□ 0.73
Cacna2d4Q5RJF7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna2d4Q5RJF7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna2d4Q5RJF7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cacna2d4Q5RJF7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna2d4Q5RJF7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cacna2d4Q5RJF7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna2d4Q5RJF7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cacna2d4Q5RJF7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cacna2d4Q5RJF7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna2d4Q5RJF7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.61■□□□□ 0.73
Cacna2d4Q5RJF7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.61■□□□□ 0.73
Cacna2d4Q5RJF7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna2d4Q5RJF7 Mir2861-201ENSMUST00000175539 82 ntBASIC19.61■□□□□ 0.73
Cacna2d4Q5RJF7 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.61■□□□□ 0.73
Cacna2d4Q5RJF7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna2d4Q5RJF7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna2d4Q5RJF7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna2d4Q5RJF7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna2d4Q5RJF7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cacna2d4Q5RJF7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.61■□□□□ 0.73
Cacna2d4Q5RJF7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.6■□□□□ 0.73
Cacna2d4Q5RJF7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna2d4Q5RJF7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cacna2d4Q5RJF7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cacna2d4Q5RJF7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.6■□□□□ 0.73
Cacna2d4Q5RJF7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.6■□□□□ 0.73
Cacna2d4Q5RJF7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna2d4Q5RJF7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna2d4Q5RJF7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna2d4Q5RJF7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna2d4Q5RJF7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna2d4Q5RJF7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna2d4Q5RJF7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna2d4Q5RJF7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cacna2d4Q5RJF7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms