Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav3-1Q5R1I8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-1Q5R1I8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-1Q5R1I8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-1Q5R1I8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-1Q5R1I8 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav3-1Q5R1I8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-1Q5R1I8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Trav3-1Q5R1I8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-1Q5R1I8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-1Q5R1I8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-1Q5R1I8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-1Q5R1I8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-1Q5R1I8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-1Q5R1I8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-1Q5R1I8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-1Q5R1I8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-1Q5R1I8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-1Q5R1I8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav3-1Q5R1I8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Gm24804-201ENSMUST00000174982 85 ntBASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav3-1Q5R1I8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav3-1Q5R1I8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms