Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3-3Q5R1C3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-3Q5R1C3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-3Q5R1C3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-3Q5R1C3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-3Q5R1C3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav3-3Q5R1C3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav3-3Q5R1C3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav3-3Q5R1C3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-3Q5R1C3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-3Q5R1C3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-3Q5R1C3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-3Q5R1C3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-3Q5R1C3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-3Q5R1C3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-3Q5R1C3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-3Q5R1C3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Gm9959-201ENSMUST00000068277 390 ntBASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-3Q5R1C3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-3Q5R1C3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-3Q5R1C3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Gm45102-201ENSMUST00000207427 857 ntBASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Rps24-207ENSMUST00000224568 714 ntBASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms