Protein–RNA interactions for Protein: Q5NC97

Vmn1r209, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r209Q5NC97 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r209Q5NC97 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r209Q5NC97 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r209Q5NC97 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Vmn1r209Q5NC97 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r209Q5NC97 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Vmn1r209Q5NC97 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.05■□□□□ 0.8
Vmn1r209Q5NC97 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r209Q5NC97 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r209Q5NC97 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.05■□□□□ 0.8
Vmn1r209Q5NC97 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r209Q5NC97 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r209Q5NC97 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r209Q5NC97 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r209Q5NC97 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r209Q5NC97 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r209Q5NC97 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r209Q5NC97 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Vmn1r209Q5NC97 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Vmn1r209Q5NC97 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r209Q5NC97 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r209Q5NC97 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r209Q5NC97 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r209Q5NC97 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r209Q5NC97 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r209Q5NC97 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.04■□□□□ 0.8
Vmn1r209Q5NC97 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.04■□□□□ 0.8
Vmn1r209Q5NC97 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.04■□□□□ 0.8
Vmn1r209Q5NC97 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r209Q5NC97 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Vmn1r209Q5NC97 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r209Q5NC97 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Vmn1r209Q5NC97 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.04■□□□□ 0.8
Vmn1r209Q5NC97 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r209Q5NC97 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r209Q5NC97 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r209Q5NC97 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r209Q5NC97 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r209Q5NC97 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.02■□□□□ 0.8
Vmn1r209Q5NC97 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.02■□□□□ 0.8
Vmn1r209Q5NC97 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.02■□□□□ 0.8
Vmn1r209Q5NC97 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r209Q5NC97 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r209Q5NC97 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r209Q5NC97 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Vmn1r209Q5NC97 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vmn1r209Q5NC97 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vmn1r209Q5NC97 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.02■□□□□ 0.79
Vmn1r209Q5NC97 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vmn1r209Q5NC97 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vmn1r209Q5NC97 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vmn1r209Q5NC97 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vmn1r209Q5NC97 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r209Q5NC97 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r209Q5NC97 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r209Q5NC97 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r209Q5NC97 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.01■□□□□ 0.79
Vmn1r209Q5NC97 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Vmn1r209Q5NC97 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r209Q5NC97 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Vmn1r209Q5NC97 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r209Q5NC97 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r209Q5NC97 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Vmn1r209Q5NC97 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r209Q5NC97 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Vmn1r209Q5NC97 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Vmn1r209Q5NC97 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r209Q5NC97 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r209Q5NC97 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r209Q5NC97 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r209Q5NC97 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r209Q5NC97 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20■□□□□ 0.79
Vmn1r209Q5NC97 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Vmn1r209Q5NC97 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r209Q5NC97 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r209Q5NC97 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20■□□□□ 0.79
Vmn1r209Q5NC97 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms