Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Clhc1Q5M6W3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clhc1Q5M6W3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clhc1Q5M6W3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clhc1Q5M6W3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.05■□□□□ 0.32
Clhc1Q5M6W3 Gm18284-201ENSMUST00000172604 624 ntBASIC17.05■□□□□ 0.32
Clhc1Q5M6W3 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.05■□□□□ 0.32
Clhc1Q5M6W3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Clhc1Q5M6W3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clhc1Q5M6W3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clhc1Q5M6W3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clhc1Q5M6W3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.05■□□□□ 0.32
Clhc1Q5M6W3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clhc1Q5M6W3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 Gm42642-201ENSMUST00000200683 355 ntBASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clhc1Q5M6W3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clhc1Q5M6W3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.03■□□□□ 0.32
Clhc1Q5M6W3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Clhc1Q5M6W3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Clhc1Q5M6W3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clhc1Q5M6W3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clhc1Q5M6W3 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.03■□□□□ 0.32
Clhc1Q5M6W3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clhc1Q5M6W3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clhc1Q5M6W3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clhc1Q5M6W3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clhc1Q5M6W3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clhc1Q5M6W3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Clhc1Q5M6W3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clhc1Q5M6W3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clhc1Q5M6W3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clhc1Q5M6W3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clhc1Q5M6W3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clhc1Q5M6W3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clhc1Q5M6W3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clhc1Q5M6W3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clhc1Q5M6W3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clhc1Q5M6W3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clhc1Q5M6W3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clhc1Q5M6W3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clhc1Q5M6W3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clhc1Q5M6W3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clhc1Q5M6W3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.02■□□□□ 0.32
Clhc1Q5M6W3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clhc1Q5M6W3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clhc1Q5M6W3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clhc1Q5M6W3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clhc1Q5M6W3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.02■□□□□ 0.31
Clhc1Q5M6W3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.02■□□□□ 0.31
Clhc1Q5M6W3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clhc1Q5M6W3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Clhc1Q5M6W3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Clhc1Q5M6W3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
Clhc1Q5M6W3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clhc1Q5M6W3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clhc1Q5M6W3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clhc1Q5M6W3 Gm37519-201ENSMUST00000191687 2210 ntBASIC17■□□□□ 0.31
Clhc1Q5M6W3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clhc1Q5M6W3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Clhc1Q5M6W3 Hivep3-201ENSMUST00000084306 2973 ntBASIC17■□□□□ 0.31
Clhc1Q5M6W3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Clhc1Q5M6W3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17■□□□□ 0.31
Clhc1Q5M6W3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clhc1Q5M6W3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Clhc1Q5M6W3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Clhc1Q5M6W3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clhc1Q5M6W3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clhc1Q5M6W3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clhc1Q5M6W3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms