Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf20Q5DTM8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf20Q5DTM8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rnf20Q5DTM8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC21.03■□□□□ 0.96
Rnf20Q5DTM8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf20Q5DTM8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf20Q5DTM8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.02■□□□□ 0.96
Rnf20Q5DTM8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf20Q5DTM8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf20Q5DTM8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf20Q5DTM8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf20Q5DTM8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf20Q5DTM8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf20Q5DTM8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf20Q5DTM8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Rnf20Q5DTM8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.02■□□□□ 0.96
Rnf20Q5DTM8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf20Q5DTM8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf20Q5DTM8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rnf20Q5DTM8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rnf20Q5DTM8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Rnf20Q5DTM8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.01■□□□□ 0.95
Rnf20Q5DTM8 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.01■□□□□ 0.95
Rnf20Q5DTM8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf20Q5DTM8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf20Q5DTM8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Rnf20Q5DTM8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf20Q5DTM8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf20Q5DTM8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Rnf20Q5DTM8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf20Q5DTM8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Rnf20Q5DTM8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf20Q5DTM8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf20Q5DTM8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf20Q5DTM8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf20Q5DTM8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21■□□□□ 0.95
Rnf20Q5DTM8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21■□□□□ 0.95
Rnf20Q5DTM8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf20Q5DTM8 Gm20049-201ENSMUST00000219950 730 ntBASIC21■□□□□ 0.95
Rnf20Q5DTM8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21■□□□□ 0.95
Rnf20Q5DTM8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC21■□□□□ 0.95
Rnf20Q5DTM8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf20Q5DTM8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf20Q5DTM8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf20Q5DTM8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21■□□□□ 0.95
Rnf20Q5DTM8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf20Q5DTM8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf20Q5DTM8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Rnf20Q5DTM8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.98■□□□□ 0.95
Rnf20Q5DTM8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf20Q5DTM8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.98■□□□□ 0.95
Rnf20Q5DTM8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf20Q5DTM8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Rnf20Q5DTM8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.98■□□□□ 0.95
Rnf20Q5DTM8 Gm15375-201ENSMUST00000119510 849 ntBASIC20.98■□□□□ 0.95
Rnf20Q5DTM8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf20Q5DTM8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf20Q5DTM8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf20Q5DTM8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
Rnf20Q5DTM8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf20Q5DTM8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf20Q5DTM8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf20Q5DTM8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf20Q5DTM8 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.97■□□□□ 0.95
Rnf20Q5DTM8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.97■□□□□ 0.95
Rnf20Q5DTM8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf20Q5DTM8 Gm13158-201ENSMUST00000122007 736 ntBASIC20.97■□□□□ 0.95
Rnf20Q5DTM8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf20Q5DTM8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf20Q5DTM8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf20Q5DTM8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf20Q5DTM8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.97■□□□□ 0.95
Rnf20Q5DTM8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf20Q5DTM8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf20Q5DTM8 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.96■□□□□ 0.95
Rnf20Q5DTM8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.96■□□□□ 0.95
Rnf20Q5DTM8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf20Q5DTM8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rnf20Q5DTM8 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.96■□□□□ 0.95
Rnf20Q5DTM8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf20Q5DTM8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf20Q5DTM8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf20Q5DTM8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf20Q5DTM8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms