Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks1brtQ3UNC9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cks1brtQ3UNC9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1brtQ3UNC9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks1brtQ3UNC9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks1brtQ3UNC9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks1brtQ3UNC9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks1brtQ3UNC9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Cks1brtQ3UNC9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.77□□□□□ -0.36
Cks1brtQ3UNC9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cks1brtQ3UNC9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks1brtQ3UNC9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1brtQ3UNC9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1brtQ3UNC9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.77□□□□□ -0.37
Cks1brtQ3UNC9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1brtQ3UNC9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1brtQ3UNC9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1brtQ3UNC9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1brtQ3UNC9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1brtQ3UNC9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1brtQ3UNC9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1brtQ3UNC9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1brtQ3UNC9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1brtQ3UNC9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1brtQ3UNC9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1brtQ3UNC9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms