Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp30Q3UN04 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp30Q3UN04 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp30Q3UN04 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp30Q3UN04 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Usp30Q3UN04 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp30Q3UN04 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp30Q3UN04 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.72■□□□□ 0.43
Usp30Q3UN04 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp30Q3UN04 Gm18032-201ENSMUST00000222541 538 ntBASIC17.72■□□□□ 0.43
Usp30Q3UN04 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Usp30Q3UN04 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp30Q3UN04 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp30Q3UN04 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp30Q3UN04 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp30Q3UN04 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp30Q3UN04 Golph3-205ENSMUST00000228671 2842 ntBASIC17.71■□□□□ 0.43
Usp30Q3UN04 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp30Q3UN04 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp30Q3UN04 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Usp30Q3UN04 Gm10013-201ENSMUST00000106074 672 ntBASIC17.71■□□□□ 0.43
Usp30Q3UN04 Mir5130-201ENSMUST00000175160 84 ntBASIC17.71■□□□□ 0.43
Usp30Q3UN04 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp30Q3UN04 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Usp30Q3UN04 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.71■□□□□ 0.43
Usp30Q3UN04 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
Usp30Q3UN04 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp30Q3UN04 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Usp30Q3UN04 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp30Q3UN04 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp30Q3UN04 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp30Q3UN04 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp30Q3UN04 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp30Q3UN04 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.7■□□□□ 0.42
Usp30Q3UN04 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp30Q3UN04 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp30Q3UN04 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.7■□□□□ 0.42
Usp30Q3UN04 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Usp30Q3UN04 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp30Q3UN04 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.7■□□□□ 0.42
Usp30Q3UN04 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp30Q3UN04 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp30Q3UN04 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Usp30Q3UN04 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Usp30Q3UN04 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Usp30Q3UN04 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.69■□□□□ 0.42
Usp30Q3UN04 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp30Q3UN04 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp30Q3UN04 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Usp30Q3UN04 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Usp30Q3UN04 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp30Q3UN04 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp30Q3UN04 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.69■□□□□ 0.42
Usp30Q3UN04 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp30Q3UN04 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.69■□□□□ 0.42
Usp30Q3UN04 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Usp30Q3UN04 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Usp30Q3UN04 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp30Q3UN04 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp30Q3UN04 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp30Q3UN04 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp30Q3UN04 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp30Q3UN04 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp30Q3UN04 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp30Q3UN04 Gm7638-201ENSMUST00000121348 967 ntBASIC17.68■□□□□ 0.42
Usp30Q3UN04 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.68■□□□□ 0.42
Usp30Q3UN04 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp30Q3UN04 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp30Q3UN04 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp30Q3UN04 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp30Q3UN04 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
Usp30Q3UN04 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp30Q3UN04 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp30Q3UN04 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp30Q3UN04 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp30Q3UN04 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp30Q3UN04 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.67■□□□□ 0.42
Usp30Q3UN04 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.67■□□□□ 0.42
Usp30Q3UN04 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp30Q3UN04 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms