Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Gm44549-201ENSMUST00000208351 577 ntBASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smu1Q3UKJ7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smu1Q3UKJ7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Smu1Q3UKJ7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smu1Q3UKJ7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smu1Q3UKJ7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smu1Q3UKJ7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Smu1Q3UKJ7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smu1Q3UKJ7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smu1Q3UKJ7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Smu1Q3UKJ7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smu1Q3UKJ7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smu1Q3UKJ7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smu1Q3UKJ7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smu1Q3UKJ7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smu1Q3UKJ7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Flg-201ENSMUST00000050758 1488 ntBASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smu1Q3UKJ7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smu1Q3UKJ7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smu1Q3UKJ7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smu1Q3UKJ7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smu1Q3UKJ7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms