Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnrc6aQ3UHK8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnrc6aQ3UHK8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnrc6aQ3UHK8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
Tnrc6aQ3UHK8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnrc6aQ3UHK8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnrc6aQ3UHK8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnrc6aQ3UHK8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Tnrc6aQ3UHK8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tnrc6aQ3UHK8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.36■□□□□ 0.21
Tnrc6aQ3UHK8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnrc6aQ3UHK8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnrc6aQ3UHK8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Tnrc6aQ3UHK8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Tnrc6aQ3UHK8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Tnrc6aQ3UHK8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.36■□□□□ 0.21
Tnrc6aQ3UHK8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnrc6aQ3UHK8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnrc6aQ3UHK8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnrc6aQ3UHK8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnrc6aQ3UHK8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Tnrc6aQ3UHK8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Tnrc6aQ3UHK8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Tnrc6aQ3UHK8 Gm9103-201ENSMUST00000119371 405 ntBASIC16.34■□□□□ 0.21
Tnrc6aQ3UHK8 Mir1668-201ENSMUST00000184114 107 ntBASIC16.34■□□□□ 0.21
Tnrc6aQ3UHK8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnrc6aQ3UHK8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tnrc6aQ3UHK8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnrc6aQ3UHK8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnrc6aQ3UHK8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnrc6aQ3UHK8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tnrc6aQ3UHK8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnrc6aQ3UHK8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnrc6aQ3UHK8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnrc6aQ3UHK8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnrc6aQ3UHK8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.33■□□□□ 0.21
Tnrc6aQ3UHK8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tnrc6aQ3UHK8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Tnrc6aQ3UHK8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Tnrc6aQ3UHK8 Gm7284-201ENSMUST00000131667 944 ntBASIC16.33■□□□□ 0.21
Tnrc6aQ3UHK8 Gm9013-201ENSMUST00000132939 882 ntBASIC16.33■□□□□ 0.21
Tnrc6aQ3UHK8 Mir5130-201ENSMUST00000175160 84 ntBASIC16.33■□□□□ 0.21
Tnrc6aQ3UHK8 Gm37025-201ENSMUST00000195159 829 ntBASIC16.33■□□□□ 0.21
Tnrc6aQ3UHK8 Gm5587-201ENSMUST00000206270 674 ntBASIC16.33■□□□□ 0.21
Tnrc6aQ3UHK8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.33■□□□□ 0.21
Tnrc6aQ3UHK8 Gm7791-201ENSMUST00000219066 539 ntBASIC16.33■□□□□ 0.21
Tnrc6aQ3UHK8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.33■□□□□ 0.21
Tnrc6aQ3UHK8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tnrc6aQ3UHK8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
Tnrc6aQ3UHK8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnrc6aQ3UHK8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnrc6aQ3UHK8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.33■□□□□ 0.2
Tnrc6aQ3UHK8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tnrc6aQ3UHK8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.33■□□□□ 0.2
Tnrc6aQ3UHK8 Gm9731-201ENSMUST00000209480 747 ntBASIC16.33■□□□□ 0.2
Tnrc6aQ3UHK8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Tnrc6aQ3UHK8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Tnrc6aQ3UHK8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnrc6aQ3UHK8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnrc6aQ3UHK8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Tnrc6aQ3UHK8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnrc6aQ3UHK8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnrc6aQ3UHK8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Tnrc6aQ3UHK8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnrc6aQ3UHK8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnrc6aQ3UHK8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.32■□□□□ 0.2
Tnrc6aQ3UHK8 Gm22697-201ENSMUST00000175194 63 ntBASIC16.32■□□□□ 0.2
Tnrc6aQ3UHK8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnrc6aQ3UHK8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnrc6aQ3UHK8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.32■□□□□ 0.2
Tnrc6aQ3UHK8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnrc6aQ3UHK8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnrc6aQ3UHK8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnrc6aQ3UHK8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms