Protein–RNA interactions for Protein: Q3UFY4

Rsph3a, Radial spoke head protein 3 homolog A, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3aQ3UFY4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.2■□□□□ 0.98
Rsph3aQ3UFY4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rsph3aQ3UFY4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3aQ3UFY4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3aQ3UFY4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rsph3aQ3UFY4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3aQ3UFY4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3aQ3UFY4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rsph3aQ3UFY4 Gm7514-201ENSMUST00000209475 934 ntBASIC21.19■□□□□ 0.98
Rsph3aQ3UFY4 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.19■□□□□ 0.98
Rsph3aQ3UFY4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3aQ3UFY4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3aQ3UFY4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3aQ3UFY4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3aQ3UFY4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rsph3aQ3UFY4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3aQ3UFY4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.18■□□□□ 0.98
Rsph3aQ3UFY4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC21.18■□□□□ 0.98
Rsph3aQ3UFY4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3aQ3UFY4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3aQ3UFY4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3aQ3UFY4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3aQ3UFY4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.18■□□□□ 0.98
Rsph3aQ3UFY4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3aQ3UFY4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3aQ3UFY4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3aQ3UFY4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3aQ3UFY4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3aQ3UFY4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rsph3aQ3UFY4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rsph3aQ3UFY4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Rsph3aQ3UFY4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.17■□□□□ 0.98
Rsph3aQ3UFY4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.17■□□□□ 0.98
Rsph3aQ3UFY4 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.17■□□□□ 0.98
Rsph3aQ3UFY4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rsph3aQ3UFY4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rsph3aQ3UFY4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rsph3aQ3UFY4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC21.17■□□□□ 0.98
Rsph3aQ3UFY4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.16■□□□□ 0.98
Rsph3aQ3UFY4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rsph3aQ3UFY4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rsph3aQ3UFY4 Gm15743-202ENSMUST00000182690 1901 ntBASIC21.16■□□□□ 0.98
Rsph3aQ3UFY4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rsph3aQ3UFY4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rsph3aQ3UFY4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rsph3aQ3UFY4 Gm10602-201ENSMUST00000098239 609 ntBASIC21.16■□□□□ 0.98
Rsph3aQ3UFY4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Rsph3aQ3UFY4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rsph3aQ3UFY4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rsph3aQ3UFY4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rsph3aQ3UFY4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rsph3aQ3UFY4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rsph3aQ3UFY4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Rsph3aQ3UFY4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rsph3aQ3UFY4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3aQ3UFY4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rsph3aQ3UFY4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3aQ3UFY4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3aQ3UFY4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3aQ3UFY4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.15■□□□□ 0.98
Rsph3aQ3UFY4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Rsph3aQ3UFY4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3aQ3UFY4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3aQ3UFY4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3aQ3UFY4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3aQ3UFY4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rsph3aQ3UFY4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3aQ3UFY4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph3aQ3UFY4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.14■□□□□ 0.98
Rsph3aQ3UFY4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rsph3aQ3UFY4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Rsph3aQ3UFY4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Rsph3aQ3UFY4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Rsph3aQ3UFY4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rsph3aQ3UFY4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rsph3aQ3UFY4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rsph3aQ3UFY4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rsph3aQ3UFY4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rsph3aQ3UFY4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.14■□□□□ 0.97
Rsph3aQ3UFY4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.14■□□□□ 0.97
Rsph3aQ3UFY4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rsph3aQ3UFY4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rsph3aQ3UFY4 Idnk-204ENSMUST00000226010 1898 ntBASIC21.13■□□□□ 0.97
Rsph3aQ3UFY4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Rsph3aQ3UFY4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rsph3aQ3UFY4 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.13■□□□□ 0.97
Rsph3aQ3UFY4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Rsph3aQ3UFY4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rsph3aQ3UFY4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rsph3aQ3UFY4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Rsph3aQ3UFY4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rsph3aQ3UFY4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rsph3aQ3UFY4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Rsph3aQ3UFY4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rsph3aQ3UFY4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rsph3aQ3UFY4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rsph3aQ3UFY4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rsph3aQ3UFY4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rsph3aQ3UFY4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rsph3aQ3UFY4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms