Protein–RNA interactions for Protein: Q3U4K9

Gm11110, Predicted gene 11110, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11110Q3U4K9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Gm11110Q3U4K9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.05■□□□□ -0
Gm11110Q3U4K9 Gm11249-201ENSMUST00000117071 859 ntBASIC15.05■□□□□ -0
Gm11110Q3U4K9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.05■□□□□ -0
Gm11110Q3U4K9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.05■□□□□ -0
Gm11110Q3U4K9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.05■□□□□ -0
Gm11110Q3U4K9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Gm11110Q3U4K9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.05■□□□□ -0
Gm11110Q3U4K9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.05■□□□□ -0
Gm11110Q3U4K9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm11110Q3U4K9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.05■□□□□ -0
Gm11110Q3U4K9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm11110Q3U4K9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm11110Q3U4K9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm11110Q3U4K9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Gm11110Q3U4K9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm11110Q3U4K9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm11110Q3U4K9 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.04■□□□□ -0
Gm11110Q3U4K9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm11110Q3U4K9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm11110Q3U4K9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm11110Q3U4K9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm11110Q3U4K9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Gm11110Q3U4K9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Gm11110Q3U4K9 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.04■□□□□ -0
Gm11110Q3U4K9 Gm15375-201ENSMUST00000119510 849 ntBASIC15.04■□□□□ -0
Gm11110Q3U4K9 Gm11643-201ENSMUST00000119578 864 ntBASIC15.04■□□□□ -0
Gm11110Q3U4K9 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.04■□□□□ -0
Gm11110Q3U4K9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.04■□□□□ -0
Gm11110Q3U4K9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Gm11110Q3U4K9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gm11110Q3U4K9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.04■□□□□ -0
Gm11110Q3U4K9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gm11110Q3U4K9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gm11110Q3U4K9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gm11110Q3U4K9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.04■□□□□ -0
Gm11110Q3U4K9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gm11110Q3U4K9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm11110Q3U4K9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm11110Q3U4K9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gm11110Q3U4K9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm11110Q3U4K9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm11110Q3U4K9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Gm11110Q3U4K9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gm11110Q3U4K9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Gm11110Q3U4K9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm11110Q3U4K9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm11110Q3U4K9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gm11110Q3U4K9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gm11110Q3U4K9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.03■□□□□ -0
Gm11110Q3U4K9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm11110Q3U4K9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm11110Q3U4K9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Gm11110Q3U4K9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm11110Q3U4K9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm11110Q3U4K9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.02■□□□□ -0
Gm11110Q3U4K9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Gm11110Q3U4K9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Gm11110Q3U4K9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm11110Q3U4K9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm11110Q3U4K9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm11110Q3U4K9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm11110Q3U4K9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm11110Q3U4K9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.02■□□□□ -0
Gm11110Q3U4K9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm11110Q3U4K9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.02■□□□□ -0
Gm11110Q3U4K9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Gm11110Q3U4K9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm11110Q3U4K9 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.02■□□□□ -0
Gm11110Q3U4K9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm11110Q3U4K9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm11110Q3U4K9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Gm11110Q3U4K9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm11110Q3U4K9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm11110Q3U4K9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Gm11110Q3U4K9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Gm11110Q3U4K9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm11110Q3U4K9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Gm11110Q3U4K9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm11110Q3U4K9 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm11110Q3U4K9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms