Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.79■□□□□ 0.28
Khdc4Q3TCX3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc4Q3TCX3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc4Q3TCX3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Khdc4Q3TCX3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc4Q3TCX3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc4Q3TCX3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.78■□□□□ 0.28
Khdc4Q3TCX3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc4Q3TCX3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc4Q3TCX3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc4Q3TCX3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc4Q3TCX3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc4Q3TCX3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc4Q3TCX3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc4Q3TCX3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc4Q3TCX3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Khdc4Q3TCX3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc4Q3TCX3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc4Q3TCX3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc4Q3TCX3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc4Q3TCX3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc4Q3TCX3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc4Q3TCX3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.77■□□□□ 0.28
Khdc4Q3TCX3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc4Q3TCX3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc4Q3TCX3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc4Q3TCX3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc4Q3TCX3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc4Q3TCX3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc4Q3TCX3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Khdc4Q3TCX3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Khdc4Q3TCX3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Khdc4Q3TCX3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Khdc4Q3TCX3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Khdc4Q3TCX3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Khdc4Q3TCX3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Khdc4Q3TCX3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Khdc4Q3TCX3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Khdc4Q3TCX3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.77■□□□□ 0.27
Khdc4Q3TCX3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Gm5417-201ENSMUST00000079706 384 ntBASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Zfp783-201ENSMUST00000095946 670 ntBASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Khdc4Q3TCX3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Mir5122-201ENSMUST00000175004 89 ntBASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Gm9987-201ENSMUST00000069768 567 ntBASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.75■□□□□ 0.27
Khdc4Q3TCX3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms