Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Emx1Q04742 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.44■□□□□ 0.22
Emx1Q04742 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Emx1Q04742 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.44■□□□□ 0.22
Emx1Q04742 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Emx1Q04742 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Emx1Q04742 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Emx1Q04742 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Emx1Q04742 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Emx1Q04742 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Emx1Q04742 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Emx1Q04742 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Emx1Q04742 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Emx1Q04742 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Emx1Q04742 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Emx1Q04742 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Emx1Q04742 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.43■□□□□ 0.22
Emx1Q04742 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Emx1Q04742 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.43■□□□□ 0.22
Emx1Q04742 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Emx1Q04742 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Emx1Q04742 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Emx1Q04742 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Emx1Q04742 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Emx1Q04742 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Emx1Q04742 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Emx1Q04742 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Emx1Q04742 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Emx1Q04742 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Emx1Q04742 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Emx1Q04742 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Emx1Q04742 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Emx1Q04742 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Emx1Q04742 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Emx1Q04742 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.42■□□□□ 0.22
Emx1Q04742 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Emx1Q04742 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Emx1Q04742 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Emx1Q04742 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Emx1Q04742 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Emx1Q04742 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Emx1Q04742 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Emx1Q04742 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Emx1Q04742 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Emx1Q04742 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Emx1Q04742 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Emx1Q04742 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Emx1Q04742 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Emx1Q04742 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.41■□□□□ 0.22
Emx1Q04742 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Emx1Q04742 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Emx1Q04742 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Emx1Q04742 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Emx1Q04742 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.41■□□□□ 0.22
Emx1Q04742 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Emx1Q04742 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Emx1Q04742 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Emx1Q04742 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Emx1Q04742 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Emx1Q04742 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Emx1Q04742 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.4■□□□□ 0.22
Emx1Q04742 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Emx1Q04742 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Emx1Q04742 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Emx1Q04742 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Emx1Q04742 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Emx1Q04742 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Emx1Q04742 Gm7290-201ENSMUST00000104990 617 ntBASIC16.4■□□□□ 0.22
Emx1Q04742 Gm12918-201ENSMUST00000120234 636 ntBASIC16.4■□□□□ 0.22
Emx1Q04742 Gm15710-201ENSMUST00000121821 636 ntBASIC16.4■□□□□ 0.22
Emx1Q04742 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Emx1Q04742 Nespas-201ENSMUST00000143738 1083 ntBASIC16.4■□□□□ 0.22
Emx1Q04742 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Emx1Q04742 Gm5075-201ENSMUST00000196916 622 ntBASIC16.4■□□□□ 0.22
Emx1Q04742 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Emx1Q04742 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.4■□□□□ 0.22
Emx1Q04742 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.4■□□□□ 0.22
Emx1Q04742 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.4■□□□□ 0.22
Emx1Q04742 Haglr-201ENSMUST00000100000 2085 ntBASIC16.4■□□□□ 0.22
Emx1Q04742 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Emx1Q04742 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Emx1Q04742 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Emx1Q04742 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Emx1Q04742 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Emx1Q04742 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms