Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1aP97445 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cacna1aP97445 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1aP97445 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cacna1aP97445 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cacna1aP97445 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cacna1aP97445 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cacna1aP97445 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.24■□□□□ 0.19
Cacna1aP97445 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cacna1aP97445 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cacna1aP97445 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cacna1aP97445 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1aP97445 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.23■□□□□ 0.19
Cacna1aP97445 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1aP97445 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.23■□□□□ 0.19
Cacna1aP97445 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1aP97445 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Cacna1aP97445 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.23■□□□□ 0.19
Cacna1aP97445 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Cacna1aP97445 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1aP97445 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1aP97445 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1aP97445 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.23■□□□□ 0.19
Cacna1aP97445 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1aP97445 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.23■□□□□ 0.19
Cacna1aP97445 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1aP97445 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1aP97445 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Cacna1aP97445 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1aP97445 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1aP97445 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cacna1aP97445 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Cacna1aP97445 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Cacna1aP97445 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1aP97445 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1aP97445 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1aP97445 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cacna1aP97445 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.22■□□□□ 0.19
Cacna1aP97445 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1aP97445 Gm13401-201ENSMUST00000117074 291 ntBASIC16.22■□□□□ 0.19
Cacna1aP97445 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1aP97445 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1aP97445 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1aP97445 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1aP97445 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.22■□□□□ 0.19
Cacna1aP97445 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.21■□□□□ 0.19
Cacna1aP97445 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1aP97445 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1aP97445 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1aP97445 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1aP97445 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cacna1aP97445 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.21■□□□□ 0.19
Cacna1aP97445 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.21■□□□□ 0.19
Cacna1aP97445 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.21■□□□□ 0.19
Cacna1aP97445 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
Cacna1aP97445 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cacna1aP97445 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1aP97445 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1aP97445 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.21■□□□□ 0.19
Cacna1aP97445 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1aP97445 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Cacna1aP97445 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.21■□□□□ 0.18
Cacna1aP97445 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Cacna1aP97445 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.21■□□□□ 0.18
Cacna1aP97445 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Cacna1aP97445 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.2■□□□□ 0.18
Cacna1aP97445 Gm13474-201ENSMUST00000122466 815 ntBASIC16.2■□□□□ 0.18
Cacna1aP97445 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 Gm17808-201ENSMUST00000200859 894 ntBASIC16.2■□□□□ 0.18
Cacna1aP97445 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1aP97445 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cacna1aP97445 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms