Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lig3P97386 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Lig3P97386 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lig3P97386 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lig3P97386 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lig3P97386 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lig3P97386 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lig3P97386 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lig3P97386 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.17■□□□□ 0.66
Lig3P97386 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lig3P97386 Gm27741-201ENSMUST00000185060 237 ntBASIC19.17■□□□□ 0.66
Lig3P97386 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.17■□□□□ 0.66
Lig3P97386 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Lig3P97386 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lig3P97386 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lig3P97386 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lig3P97386 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lig3P97386 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lig3P97386 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Lig3P97386 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lig3P97386 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lig3P97386 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lig3P97386 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lig3P97386 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lig3P97386 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lig3P97386 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Lig3P97386 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lig3P97386 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lig3P97386 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lig3P97386 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.16■□□□□ 0.66
Lig3P97386 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lig3P97386 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Lig3P97386 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.16■□□□□ 0.66
Lig3P97386 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lig3P97386 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lig3P97386 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lig3P97386 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lig3P97386 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Lig3P97386 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lig3P97386 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lig3P97386 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lig3P97386 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lig3P97386 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lig3P97386 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Lig3P97386 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lig3P97386 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.15■□□□□ 0.66
Lig3P97386 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Lig3P97386 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lig3P97386 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lig3P97386 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lig3P97386 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lig3P97386 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Lig3P97386 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Lig3P97386 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lig3P97386 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.15■□□□□ 0.66
Lig3P97386 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lig3P97386 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lig3P97386 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lig3P97386 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lig3P97386 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lig3P97386 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lig3P97386 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lig3P97386 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lig3P97386 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lig3P97386 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lig3P97386 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lig3P97386 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Lig3P97386 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lig3P97386 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lig3P97386 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lig3P97386 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lig3P97386 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lig3P97386 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lig3P97386 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.13■□□□□ 0.65
Lig3P97386 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.13■□□□□ 0.65
Lig3P97386 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lig3P97386 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.13■□□□□ 0.65
Lig3P97386 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lig3P97386 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.13■□□□□ 0.65
Lig3P97386 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lig3P97386 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Lig3P97386 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lig3P97386 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lig3P97386 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lig3P97386 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Lig3P97386 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lig3P97386 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lig3P97386 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lig3P97386 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lig3P97386 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lig3P97386 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lig3P97386 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lig3P97386 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lig3P97386 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lig3P97386 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lig3P97386 Gm30025-201ENSMUST00000218555 728 ntBASIC19.12■□□□□ 0.65
Lig3P97386 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lig3P97386 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lig3P97386 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.12■□□□□ 0.65
Lig3P97386 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms