Protein–RNA interactions for Protein: P97357

Taf1a, TATA box-binding protein-associated factor RNA polymerase I subunit A, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1aP97357 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Taf1aP97357 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Taf1aP97357 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.31■□□□□ 0.2
Taf1aP97357 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Taf1aP97357 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.31■□□□□ 0.2
Taf1aP97357 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.31■□□□□ 0.2
Taf1aP97357 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Taf1aP97357 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Taf1aP97357 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Taf1aP97357 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Taf1aP97357 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Taf1aP97357 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Taf1aP97357 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Taf1aP97357 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.31■□□□□ 0.2
Taf1aP97357 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Taf1aP97357 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Taf1aP97357 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Taf1aP97357 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Taf1aP97357 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Taf1aP97357 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Taf1aP97357 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Taf1aP97357 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Taf1aP97357 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Taf1aP97357 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Taf1aP97357 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Taf1aP97357 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Taf1aP97357 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.3■□□□□ 0.2
Taf1aP97357 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.3■□□□□ 0.2
Taf1aP97357 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.3■□□□□ 0.2
Taf1aP97357 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.3■□□□□ 0.2
Taf1aP97357 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.3■□□□□ 0.2
Taf1aP97357 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Taf1aP97357 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Taf1aP97357 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Taf1aP97357 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Taf1aP97357 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Taf1aP97357 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.3■□□□□ 0.2
Taf1aP97357 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Taf1aP97357 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Taf1aP97357 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Taf1aP97357 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Taf1aP97357 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Taf1aP97357 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Taf1aP97357 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.29■□□□□ 0.2
Taf1aP97357 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Taf1aP97357 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Taf1aP97357 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Taf1aP97357 Gm42569-201ENSMUST00000200539 472 ntBASIC16.29■□□□□ 0.2
Taf1aP97357 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Taf1aP97357 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.29■□□□□ 0.2
Taf1aP97357 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Taf1aP97357 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.29■□□□□ 0.2
Taf1aP97357 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Taf1aP97357 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Taf1aP97357 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Taf1aP97357 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Taf1aP97357 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Taf1aP97357 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Taf1aP97357 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Taf1aP97357 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Taf1aP97357 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Taf1aP97357 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Taf1aP97357 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Taf1aP97357 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Taf1aP97357 Gm42642-201ENSMUST00000200683 355 ntBASIC16.28■□□□□ 0.2
Taf1aP97357 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Taf1aP97357 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Taf1aP97357 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Taf1aP97357 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Taf1aP97357 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Taf1aP97357 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Taf1aP97357 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Taf1aP97357 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Taf1aP97357 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Taf1aP97357 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Taf1aP97357 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.27■□□□□ 0.2
Taf1aP97357 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Taf1aP97357 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.27■□□□□ 0.2
Taf1aP97357 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.27■□□□□ 0.2
Taf1aP97357 Gm7291-201ENSMUST00000199147 382 ntBASIC16.27■□□□□ 0.2
Taf1aP97357 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Taf1aP97357 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Taf1aP97357 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Taf1aP97357 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.27■□□□□ 0.19
Taf1aP97357 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Taf1aP97357 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Taf1aP97357 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Taf1aP97357 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Taf1aP97357 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.26■□□□□ 0.19
Taf1aP97357 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Taf1aP97357 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.26■□□□□ 0.19
Taf1aP97357 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Taf1aP97357 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Taf1aP97357 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
Taf1aP97357 Gm7514-201ENSMUST00000209475 934 ntBASIC16.26■□□□□ 0.19
Taf1aP97357 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Taf1aP97357 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Taf1aP97357 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Taf1aP97357 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Taf1aP97357 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms