Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SgcgP82348 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SgcgP82348 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SgcgP82348 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SgcgP82348 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.4■□□□□ 0.38
SgcgP82348 Gm11539-201ENSMUST00000119837 557 ntBASIC17.4■□□□□ 0.38
SgcgP82348 Gm13436-201ENSMUST00000120418 567 ntBASIC17.4■□□□□ 0.38
SgcgP82348 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.4■□□□□ 0.38
SgcgP82348 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.4■□□□□ 0.38
SgcgP82348 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SgcgP82348 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SgcgP82348 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcgP82348 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcgP82348 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.39■□□□□ 0.37
SgcgP82348 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcgP82348 Gm13401-201ENSMUST00000117074 291 ntBASIC17.39■□□□□ 0.37
SgcgP82348 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SgcgP82348 Gm7977-201ENSMUST00000193787 748 ntBASIC17.39■□□□□ 0.37
SgcgP82348 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcgP82348 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcgP82348 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcgP82348 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcgP82348 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcgP82348 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SgcgP82348 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcgP82348 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcgP82348 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcgP82348 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcgP82348 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SgcgP82348 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcgP82348 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcgP82348 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcgP82348 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcgP82348 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.38■□□□□ 0.37
SgcgP82348 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcgP82348 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcgP82348 Gm6433-201ENSMUST00000118634 875 ntBASIC17.38■□□□□ 0.37
SgcgP82348 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SgcgP82348 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcgP82348 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcgP82348 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SgcgP82348 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcgP82348 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcgP82348 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SgcgP82348 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcgP82348 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SgcgP82348 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcgP82348 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcgP82348 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SgcgP82348 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcgP82348 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.37■□□□□ 0.37
SgcgP82348 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcgP82348 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.37■□□□□ 0.37
SgcgP82348 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.37■□□□□ 0.37
SgcgP82348 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.37■□□□□ 0.37
SgcgP82348 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.37■□□□□ 0.37
SgcgP82348 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcgP82348 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SgcgP82348 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcgP82348 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SgcgP82348 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.37■□□□□ 0.37
SgcgP82348 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SgcgP82348 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SgcgP82348 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.37■□□□□ 0.37
SgcgP82348 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcgP82348 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SgcgP82348 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcgP82348 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcgP82348 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcgP82348 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SgcgP82348 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SgcgP82348 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcgP82348 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SgcgP82348 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SgcgP82348 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcgP82348 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SgcgP82348 Gm13559-201ENSMUST00000120476 863 ntBASIC17.36■□□□□ 0.37
SgcgP82348 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.36■□□□□ 0.37
SgcgP82348 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcgP82348 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SgcgP82348 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.36■□□□□ 0.37
SgcgP82348 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms