Protein–RNA interactions for Protein: P70663

Sparcl1, SPARC-like protein 1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sparcl1P70663 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Sparcl1P70663 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.33■□□□□ 0.68
Sparcl1P70663 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sparcl1P70663 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sparcl1P70663 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Sparcl1P70663 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 BC021767-201ENSMUST00000126387 1716 ntBASIC19.32■□□□□ 0.68
Sparcl1P70663 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Sparcl1P70663 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sparcl1P70663 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sparcl1P70663 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sparcl1P70663 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sparcl1P70663 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sparcl1P70663 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sparcl1P70663 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Sparcl1P70663 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sparcl1P70663 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sparcl1P70663 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sparcl1P70663 Gm13559-201ENSMUST00000120476 863 ntBASIC19.31■□□□□ 0.68
Sparcl1P70663 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.31■□□□□ 0.68
Sparcl1P70663 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.31■□□□□ 0.68
Sparcl1P70663 Gm3375-201ENSMUST00000203929 796 ntBASIC19.31■□□□□ 0.68
Sparcl1P70663 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sparcl1P70663 Timm23-208ENSMUST00000226683 750 ntBASIC19.31■□□□□ 0.68
Sparcl1P70663 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Sparcl1P70663 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sparcl1P70663 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sparcl1P70663 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sparcl1P70663 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sparcl1P70663 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sparcl1P70663 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sparcl1P70663 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sparcl1P70663 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.31■□□□□ 0.68
Sparcl1P70663 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sparcl1P70663 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.3■□□□□ 0.68
Sparcl1P70663 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.3■□□□□ 0.68
Sparcl1P70663 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sparcl1P70663 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sparcl1P70663 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Sparcl1P70663 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sparcl1P70663 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sparcl1P70663 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sparcl1P70663 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sparcl1P70663 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sparcl1P70663 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sparcl1P70663 Odf3b-204ENSMUST00000227834 930 ntBASIC19.3■□□□□ 0.68
Sparcl1P70663 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Sparcl1P70663 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sparcl1P70663 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sparcl1P70663 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sparcl1P70663 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sparcl1P70663 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sparcl1P70663 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sparcl1P70663 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sparcl1P70663 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.3■□□□□ 0.68
Sparcl1P70663 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sparcl1P70663 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.3■□□□□ 0.68
Sparcl1P70663 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sparcl1P70663 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sparcl1P70663 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sparcl1P70663 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sparcl1P70663 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sparcl1P70663 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sparcl1P70663 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sparcl1P70663 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sparcl1P70663 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sparcl1P70663 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Sparcl1P70663 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sparcl1P70663 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sparcl1P70663 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sparcl1P70663 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sparcl1P70663 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sparcl1P70663 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sparcl1P70663 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
Sparcl1P70663 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Sparcl1P70663 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sparcl1P70663 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sparcl1P70663 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.28■□□□□ 0.68
Sparcl1P70663 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sparcl1P70663 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
Sparcl1P70663 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sparcl1P70663 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms