Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb1P70662 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ldb1P70662 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ldb1P70662 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb1P70662 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb1P70662 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb1P70662 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb1P70662 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb1P70662 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb1P70662 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.57■□□□□ 0.4
Ldb1P70662 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb1P70662 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb1P70662 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb1P70662 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ldb1P70662 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb1P70662 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ldb1P70662 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ldb1P70662 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ldb1P70662 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ldb1P70662 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb1P70662 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.56■□□□□ 0.4
Ldb1P70662 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb1P70662 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb1P70662 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb1P70662 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb1P70662 Mir2861-201ENSMUST00000175539 82 ntBASIC17.56■□□□□ 0.4
Ldb1P70662 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.56■□□□□ 0.4
Ldb1P70662 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ldb1P70662 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb1P70662 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb1P70662 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb1P70662 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb1P70662 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb1P70662 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb1P70662 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb1P70662 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb1P70662 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ldb1P70662 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb1P70662 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb1P70662 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ldb1P70662 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb1P70662 Gm12527-201ENSMUST00000117967 564 ntBASIC17.55■□□□□ 0.4
Ldb1P70662 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.55■□□□□ 0.4
Ldb1P70662 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.55■□□□□ 0.4
Ldb1P70662 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb1P70662 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.55■□□□□ 0.4
Ldb1P70662 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.55■□□□□ 0.4
Ldb1P70662 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb1P70662 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb1P70662 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb1P70662 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb1P70662 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb1P70662 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb1P70662 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb1P70662 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb1P70662 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ldb1P70662 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.54■□□□□ 0.4
Ldb1P70662 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb1P70662 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb1P70662 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.54■□□□□ 0.4
Ldb1P70662 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb1P70662 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.54■□□□□ 0.4
Ldb1P70662 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb1P70662 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.54■□□□□ 0.4
Ldb1P70662 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb1P70662 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ldb1P70662 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb1P70662 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb1P70662 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb1P70662 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb1P70662 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ldb1P70662 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb1P70662 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ldb1P70662 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb1P70662 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb1P70662 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.53■□□□□ 0.4
Ldb1P70662 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb1P70662 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb1P70662 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb1P70662 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb1P70662 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb1P70662 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ldb1P70662 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Ldb1P70662 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb1P70662 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.53■□□□□ 0.4
Ldb1P70662 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.53■□□□□ 0.4
Ldb1P70662 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb1P70662 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.53■□□□□ 0.4
Ldb1P70662 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb1P70662 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb1P70662 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.53■□□□□ 0.4
Ldb1P70662 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb1P70662 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.53■□□□□ 0.4
Ldb1P70662 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ldb1P70662 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Ldb1P70662 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ldb1P70662 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ldb1P70662 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ldb1P70662 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ldb1P70662 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms