Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Uba52P62984 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Uba52P62984 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Uba52P62984 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Uba52P62984 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Uba52P62984 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba52P62984 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba52P62984 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Uba52P62984 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba52P62984 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba52P62984 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.32■□□□□ 0.04
Uba52P62984 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.32■□□□□ 0.04
Uba52P62984 Gm22240-201ENSMUST00000175225 82 ntBASIC15.32■□□□□ 0.04
Uba52P62984 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba52P62984 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba52P62984 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba52P62984 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Uba52P62984 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba52P62984 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba52P62984 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba52P62984 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Uba52P62984 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba52P62984 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba52P62984 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Uba52P62984 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Uba52P62984 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba52P62984 Gm7290-201ENSMUST00000104990 617 ntBASIC15.31■□□□□ 0.04
Uba52P62984 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Uba52P62984 Gm13146-201ENSMUST00000118508 780 ntBASIC15.31■□□□□ 0.04
Uba52P62984 Gm12918-201ENSMUST00000120234 636 ntBASIC15.31■□□□□ 0.04
Uba52P62984 Gm15710-201ENSMUST00000121821 636 ntBASIC15.31■□□□□ 0.04
Uba52P62984 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.31■□□□□ 0.04
Uba52P62984 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.31■□□□□ 0.04
Uba52P62984 Gm5075-201ENSMUST00000196916 622 ntBASIC15.31■□□□□ 0.04
Uba52P62984 Gm5408-201ENSMUST00000197998 747 ntBASIC15.31■□□□□ 0.04
Uba52P62984 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.31■□□□□ 0.04
Uba52P62984 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.31■□□□□ 0.04
Uba52P62984 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba52P62984 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba52P62984 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba52P62984 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba52P62984 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.31■□□□□ 0.04
Uba52P62984 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba52P62984 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba52P62984 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Uba52P62984 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Uba52P62984 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Uba52P62984 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Uba52P62984 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba52P62984 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba52P62984 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba52P62984 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Uba52P62984 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Uba52P62984 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.3■□□□□ 0.04
Uba52P62984 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.3■□□□□ 0.04
Uba52P62984 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.3■□□□□ 0.04
Uba52P62984 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Uba52P62984 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba52P62984 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba52P62984 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba52P62984 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba52P62984 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Uba52P62984 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba52P62984 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.29■□□□□ 0.04
Uba52P62984 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.29■□□□□ 0.04
Uba52P62984 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba52P62984 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba52P62984 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Uba52P62984 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.29■□□□□ 0.04
Uba52P62984 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Uba52P62984 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Uba52P62984 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Uba52P62984 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.29■□□□□ 0.04
Uba52P62984 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba52P62984 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Uba52P62984 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba52P62984 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Uba52P62984 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba52P62984 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba52P62984 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.28■□□□□ 0.04
Uba52P62984 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba52P62984 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Uba52P62984 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba52P62984 Gm13148-201ENSMUST00000118892 745 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms