Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.62□□□□□ -0.39
Rpl39P62892 Gm43672-201ENSMUST00000199072 1731 ntBASIC12.62□□□□□ -0.39
Rpl39P62892 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.62□□□□□ -0.39
Rpl39P62892 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.62□□□□□ -0.39
Rpl39P62892 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpl39P62892 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.61□□□□□ -0.39
Rpl39P62892 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rpl39P62892 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Rpl39P62892 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Rpl39P62892 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.61□□□□□ -0.39
Rpl39P62892 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rpl39P62892 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Rpl39P62892 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpl39P62892 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.6□□□□□ -0.39
Rpl39P62892 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.6□□□□□ -0.39
Rpl39P62892 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rpl39P62892 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.6□□□□□ -0.39
Rpl39P62892 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.6□□□□□ -0.39
Rpl39P62892 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rpl39P62892 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.59□□□□□ -0.39
Rpl39P62892 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.59□□□□□ -0.39
Rpl39P62892 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC12.59□□□□□ -0.39
Rpl39P62892 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.59□□□□□ -0.39
Rpl39P62892 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Idnk-204ENSMUST00000226010 1898 ntBASIC12.59□□□□□ -0.39
Rpl39P62892 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.59□□□□□ -0.39
Rpl39P62892 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpl39P62892 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rpl39P62892 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Rpl39P62892 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rpl39P62892 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.58□□□□□ -0.4
Rpl39P62892 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl39P62892 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rpl39P62892 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms