Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube2d3P61079 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube2d3P61079 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube2d3P61079 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.63□□□□□ -0.39
Ube2d3P61079 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ube2d3P61079 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ube2d3P61079 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ube2d3P61079 Gm42642-201ENSMUST00000200683 355 ntBASIC12.63□□□□□ -0.39
Ube2d3P61079 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ube2d3P61079 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.63□□□□□ -0.39
Ube2d3P61079 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube2d3P61079 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.63□□□□□ -0.39
Ube2d3P61079 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube2d3P61079 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ube2d3P61079 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube2d3P61079 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Ube2d3P61079 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube2d3P61079 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube2d3P61079 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube2d3P61079 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube2d3P61079 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ube2d3P61079 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ube2d3P61079 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube2d3P61079 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ube2d3P61079 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ube2d3P61079 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube2d3P61079 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube2d3P61079 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ube2d3P61079 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ube2d3P61079 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.62□□□□□ -0.39
Ube2d3P61079 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube2d3P61079 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube2d3P61079 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube2d3P61079 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ube2d3P61079 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.62□□□□□ -0.39
Ube2d3P61079 Gm5874-201ENSMUST00000096101 508 ntBASIC12.62□□□□□ -0.39
Ube2d3P61079 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube2d3P61079 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube2d3P61079 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube2d3P61079 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ube2d3P61079 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube2d3P61079 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
Ube2d3P61079 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.62□□□□□ -0.39
Ube2d3P61079 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ube2d3P61079 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.62□□□□□ -0.39
Ube2d3P61079 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.62□□□□□ -0.39
Ube2d3P61079 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ube2d3P61079 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ube2d3P61079 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ube2d3P61079 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.61□□□□□ -0.39
Ube2d3P61079 Gm8969-201ENSMUST00000199694 526 ntBASIC12.61□□□□□ -0.39
Ube2d3P61079 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ube2d3P61079 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.61□□□□□ -0.39
Ube2d3P61079 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.61□□□□□ -0.39
Ube2d3P61079 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ube2d3P61079 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ube2d3P61079 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube2d3P61079 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube2d3P61079 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ube2d3P61079 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ube2d3P61079 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube2d3P61079 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube2d3P61079 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube2d3P61079 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube2d3P61079 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube2d3P61079 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube2d3P61079 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ube2d3P61079 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube2d3P61079 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.6□□□□□ -0.39
Ube2d3P61079 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ube2d3P61079 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.6□□□□□ -0.39
Ube2d3P61079 AV356131-201ENSMUST00000206201 750 ntBASIC12.6□□□□□ -0.39
Ube2d3P61079 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
Ube2d3P61079 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ube2d3P61079 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.6□□□□□ -0.39
Ube2d3P61079 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube2d3P61079 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube2d3P61079 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ube2d3P61079 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.6□□□□□ -0.39
Ube2d3P61079 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms