Protein–RNA interactions for Protein: P60897

Sem1, 26S proteasome complex subunit SEM1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sem1P60897 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sem1P60897 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sem1P60897 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sem1P60897 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Sem1P60897 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sem1P60897 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sem1P60897 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.78■□□□□ 0.28
Sem1P60897 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sem1P60897 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sem1P60897 Gm45364-201ENSMUST00000210883 159 ntBASIC16.78■□□□□ 0.28
Sem1P60897 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sem1P60897 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sem1P60897 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sem1P60897 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sem1P60897 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sem1P60897 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sem1P60897 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sem1P60897 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sem1P60897 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sem1P60897 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sem1P60897 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sem1P60897 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sem1P60897 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sem1P60897 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sem1P60897 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sem1P60897 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sem1P60897 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sem1P60897 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sem1P60897 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sem1P60897 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sem1P60897 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sem1P60897 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sem1P60897 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.77■□□□□ 0.27
Sem1P60897 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sem1P60897 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sem1P60897 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.77■□□□□ 0.27
Sem1P60897 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sem1P60897 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sem1P60897 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Sem1P60897 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
Sem1P60897 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Sem1P60897 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sem1P60897 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.76■□□□□ 0.27
Sem1P60897 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.76■□□□□ 0.27
Sem1P60897 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Sem1P60897 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.76■□□□□ 0.27
Sem1P60897 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.76■□□□□ 0.27
Sem1P60897 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Sem1P60897 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sem1P60897 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sem1P60897 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sem1P60897 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sem1P60897 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sem1P60897 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sem1P60897 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sem1P60897 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
Sem1P60897 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sem1P60897 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sem1P60897 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.75■□□□□ 0.27
Sem1P60897 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.75■□□□□ 0.27
Sem1P60897 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sem1P60897 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sem1P60897 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sem1P60897 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sem1P60897 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sem1P60897 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Sem1P60897 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sem1P60897 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sem1P60897 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sem1P60897 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sem1P60897 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sem1P60897 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Sem1P60897 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sem1P60897 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sem1P60897 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sem1P60897 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sem1P60897 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.74■□□□□ 0.27
Sem1P60897 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Sem1P60897 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sem1P60897 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sem1P60897 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms