Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rhbdl3P58873 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rhbdl3P58873 Gm37025-201ENSMUST00000195159 829 ntBASIC21■□□□□ 0.95
Rhbdl3P58873 Gm18101-201ENSMUST00000215769 548 ntBASIC21■□□□□ 0.95
Rhbdl3P58873 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC21■□□□□ 0.95
Rhbdl3P58873 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rhbdl3P58873 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rhbdl3P58873 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rhbdl3P58873 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rhbdl3P58873 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rhbdl3P58873 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.99■□□□□ 0.95
Rhbdl3P58873 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rhbdl3P58873 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rhbdl3P58873 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rhbdl3P58873 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rhbdl3P58873 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Rhbdl3P58873 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Rhbdl3P58873 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Rhbdl3P58873 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rhbdl3P58873 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rhbdl3P58873 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rhbdl3P58873 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rhbdl3P58873 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rhbdl3P58873 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rhbdl3P58873 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rhbdl3P58873 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rhbdl3P58873 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
Rhbdl3P58873 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rhbdl3P58873 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rhbdl3P58873 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rhbdl3P58873 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.98■□□□□ 0.95
Rhbdl3P58873 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Rhbdl3P58873 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rhbdl3P58873 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Rhbdl3P58873 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rhbdl3P58873 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rhbdl3P58873 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rhbdl3P58873 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.97■□□□□ 0.95
Rhbdl3P58873 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rhbdl3P58873 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rhbdl3P58873 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rhbdl3P58873 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rhbdl3P58873 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.97■□□□□ 0.95
Rhbdl3P58873 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rhbdl3P58873 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rhbdl3P58873 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rhbdl3P58873 Mir8112-201ENSMUST00000184382 131 ntBASIC20.97■□□□□ 0.95
Rhbdl3P58873 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rhbdl3P58873 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rhbdl3P58873 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rhbdl3P58873 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
Rhbdl3P58873 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rhbdl3P58873 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rhbdl3P58873 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rhbdl3P58873 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rhbdl3P58873 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rhbdl3P58873 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rhbdl3P58873 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rhbdl3P58873 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.96■□□□□ 0.95
Rhbdl3P58873 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rhbdl3P58873 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rhbdl3P58873 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rhbdl3P58873 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.96■□□□□ 0.95
Rhbdl3P58873 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rhbdl3P58873 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rhbdl3P58873 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Rhbdl3P58873 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rhbdl3P58873 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rhbdl3P58873 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.95■□□□□ 0.94
Rhbdl3P58873 Gm13474-201ENSMUST00000122466 815 ntBASIC20.95■□□□□ 0.94
Rhbdl3P58873 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rhbdl3P58873 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rhbdl3P58873 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rhbdl3P58873 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rhbdl3P58873 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rhbdl3P58873 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rhbdl3P58873 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rhbdl3P58873 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rhbdl3P58873 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rhbdl3P58873 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rhbdl3P58873 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rhbdl3P58873 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.94■□□□□ 0.94
Rhbdl3P58873 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rhbdl3P58873 Gm17661-201ENSMUST00000170317 270 ntBASIC20.94■□□□□ 0.94
Rhbdl3P58873 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rhbdl3P58873 Gm7367-201ENSMUST00000057611 492 ntBASIC20.94■□□□□ 0.94
Rhbdl3P58873 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rhbdl3P58873 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rhbdl3P58873 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rhbdl3P58873 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rhbdl3P58873 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rhbdl3P58873 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rhbdl3P58873 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Rhbdl3P58873 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rhbdl3P58873 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.93■□□□□ 0.94
Rhbdl3P58873 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rhbdl3P58873 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.93■□□□□ 0.94
Rhbdl3P58873 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rhbdl3P58873 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rhbdl3P58873 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms