Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tpm1P58771 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tpm1P58771 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tpm1P58771 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tpm1P58771 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Tpm1P58771 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tpm1P58771 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm1P58771 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm1P58771 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm1P58771 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm1P58771 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.72■□□□□ 0.75
Tpm1P58771 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.72■□□□□ 0.75
Tpm1P58771 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.72■□□□□ 0.75
Tpm1P58771 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Tpm1P58771 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm1P58771 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Tpm1P58771 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm1P58771 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.72■□□□□ 0.75
Tpm1P58771 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.72■□□□□ 0.75
Tpm1P58771 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm1P58771 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm1P58771 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm1P58771 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm1P58771 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm1P58771 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm1P58771 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm1P58771 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.71■□□□□ 0.75
Tpm1P58771 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.71■□□□□ 0.75
Tpm1P58771 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm1P58771 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Tpm1P58771 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Tpm1P58771 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm1P58771 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.71■□□□□ 0.75
Tpm1P58771 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm1P58771 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Tpm1P58771 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm1P58771 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm1P58771 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.71■□□□□ 0.74
Tpm1P58771 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Tpm1P58771 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm1P58771 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm1P58771 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Tpm1P58771 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm1P58771 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm1P58771 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm1P58771 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm1P58771 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm1P58771 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm1P58771 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm1P58771 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.69■□□□□ 0.74
Tpm1P58771 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.69■□□□□ 0.74
Tpm1P58771 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.69■□□□□ 0.74
Tpm1P58771 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm1P58771 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.69■□□□□ 0.74
Tpm1P58771 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm1P58771 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm1P58771 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm1P58771 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm1P58771 Gm45417-201ENSMUST00000209533 758 ntBASIC19.69■□□□□ 0.74
Tpm1P58771 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.69■□□□□ 0.74
Tpm1P58771 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm1P58771 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm1P58771 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Tpm1P58771 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.69■□□□□ 0.74
Tpm1P58771 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm1P58771 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm1P58771 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Tpm1P58771 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm1P58771 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.68■□□□□ 0.74
Tpm1P58771 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm1P58771 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm1P58771 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm1P58771 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.68■□□□□ 0.74
Tpm1P58771 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm1P58771 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm1P58771 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm1P58771 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Tpm1P58771 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm1P58771 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm1P58771 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Tpm1P58771 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm1P58771 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Tpm1P58771 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm1P58771 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm1P58771 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm1P58771 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm1P58771 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm1P58771 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm1P58771 Gm13146-201ENSMUST00000118508 780 ntBASIC19.67■□□□□ 0.74
Tpm1P58771 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm1P58771 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Tpm1P58771 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Tpm1P58771 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm1P58771 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm1P58771 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Tpm1P58771 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm1P58771 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm1P58771 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms