Protein–RNA interactions for Protein: P56484

Ccr8, C-C chemokine receptor type 8, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr8P56484 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccr8P56484 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccr8P56484 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccr8P56484 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccr8P56484 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccr8P56484 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccr8P56484 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccr8P56484 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccr8P56484 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccr8P56484 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccr8P56484 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccr8P56484 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccr8P56484 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccr8P56484 Gm11249-201ENSMUST00000117071 859 ntBASIC15.17■□□□□ 0.02
Ccr8P56484 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccr8P56484 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccr8P56484 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccr8P56484 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ccr8P56484 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Ccr8P56484 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.17■□□□□ 0.02
Ccr8P56484 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccr8P56484 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ccr8P56484 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccr8P56484 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccr8P56484 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ccr8P56484 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccr8P56484 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ccr8P56484 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccr8P56484 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccr8P56484 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ccr8P56484 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.16■□□□□ 0.02
Ccr8P56484 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccr8P56484 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccr8P56484 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccr8P56484 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
Ccr8P56484 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccr8P56484 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccr8P56484 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccr8P56484 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccr8P56484 Mtag2-201ENSMUST00000058665 714 ntBASIC15.16■□□□□ 0.02
Ccr8P56484 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.16■□□□□ 0.02
Ccr8P56484 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccr8P56484 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccr8P56484 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.16■□□□□ 0.02
Ccr8P56484 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccr8P56484 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccr8P56484 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccr8P56484 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccr8P56484 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccr8P56484 Mir6349-201ENSMUST00000184059 97 ntBASIC15.15■□□□□ 0.02
Ccr8P56484 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.15■□□□□ 0.02
Ccr8P56484 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccr8P56484 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Ccr8P56484 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ccr8P56484 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
Ccr8P56484 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccr8P56484 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccr8P56484 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccr8P56484 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccr8P56484 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccr8P56484 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ccr8P56484 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccr8P56484 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ccr8P56484 Gm13158-201ENSMUST00000122007 736 ntBASIC15.14■□□□□ 0.01
Ccr8P56484 Gm27275-201ENSMUST00000184318 272 ntBASIC15.14■□□□□ 0.01
Ccr8P56484 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.14■□□□□ 0.01
Ccr8P56484 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.14■□□□□ 0.01
Ccr8P56484 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccr8P56484 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccr8P56484 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccr8P56484 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ccr8P56484 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccr8P56484 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ccr8P56484 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccr8P56484 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccr8P56484 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ccr8P56484 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.14■□□□□ 0.01
Ccr8P56484 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccr8P56484 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccr8P56484 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccr8P56484 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms