Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.67■□□□□ 0.58
NcanP55066 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NcanP55066 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.67■□□□□ 0.58
NcanP55066 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NcanP55066 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
NcanP55066 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.67■□□□□ 0.58
NcanP55066 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NcanP55066 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NcanP55066 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NcanP55066 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NcanP55066 Gm14057-201ENSMUST00000120631 482 ntBASIC18.66■□□□□ 0.58
NcanP55066 Gm37025-201ENSMUST00000195159 829 ntBASIC18.66■□□□□ 0.58
NcanP55066 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NcanP55066 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NcanP55066 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NcanP55066 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NcanP55066 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NcanP55066 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NcanP55066 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
NcanP55066 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.66■□□□□ 0.58
NcanP55066 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NcanP55066 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NcanP55066 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NcanP55066 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NcanP55066 Gm10418-201ENSMUST00000100943 576 ntBASIC18.65■□□□□ 0.58
NcanP55066 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NcanP55066 Gm5264-201ENSMUST00000190584 848 ntBASIC18.65■□□□□ 0.58
NcanP55066 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NcanP55066 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NcanP55066 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NcanP55066 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.65■□□□□ 0.58
NcanP55066 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NcanP55066 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NcanP55066 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NcanP55066 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NcanP55066 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NcanP55066 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NcanP55066 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
NcanP55066 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NcanP55066 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NcanP55066 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NcanP55066 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.64■□□□□ 0.57
NcanP55066 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NcanP55066 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NcanP55066 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.64■□□□□ 0.57
NcanP55066 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NcanP55066 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.64■□□□□ 0.57
NcanP55066 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NcanP55066 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NcanP55066 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NcanP55066 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NcanP55066 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NcanP55066 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NcanP55066 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NcanP55066 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.63■□□□□ 0.57
NcanP55066 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.63■□□□□ 0.57
NcanP55066 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.63■□□□□ 0.57
NcanP55066 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.63■□□□□ 0.57
NcanP55066 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.63■□□□□ 0.57
NcanP55066 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NcanP55066 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NcanP55066 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NcanP55066 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NcanP55066 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NcanP55066 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.63■□□□□ 0.57
NcanP55066 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NcanP55066 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NcanP55066 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.62■□□□□ 0.57
NcanP55066 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.62■□□□□ 0.57
NcanP55066 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.62■□□□□ 0.57
NcanP55066 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NcanP55066 Gm43575-201ENSMUST00000196420 516 ntBASIC18.62■□□□□ 0.57
NcanP55066 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NcanP55066 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NcanP55066 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.62■□□□□ 0.57
NcanP55066 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NcanP55066 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NcanP55066 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
NcanP55066 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NcanP55066 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NcanP55066 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NcanP55066 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NcanP55066 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.61■□□□□ 0.57
NcanP55066 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NcanP55066 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.61■□□□□ 0.57
NcanP55066 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.61■□□□□ 0.57
NcanP55066 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NcanP55066 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
NcanP55066 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NcanP55066 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.61■□□□□ 0.57
NcanP55066 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NcanP55066 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NcanP55066 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NcanP55066 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NcanP55066 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NcanP55066 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.6■□□□□ 0.57
NcanP55066 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.6■□□□□ 0.57
NcanP55066 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.6■□□□□ 0.57
NcanP55066 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NcanP55066 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms