Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox1P53783 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox1P53783 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sox1P53783 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox1P53783 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sox1P53783 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sox1P53783 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sox1P53783 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Sox1P53783 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Mir5131-201ENSMUST00000175426 93 ntBASIC18.01■□□□□ 0.47
Sox1P53783 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Sox1P53783 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.01■□□□□ 0.47
Sox1P53783 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox1P53783 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18■□□□□ 0.47
Sox1P53783 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox1P53783 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox1P53783 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox1P53783 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18■□□□□ 0.47
Sox1P53783 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18■□□□□ 0.47
Sox1P53783 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18■□□□□ 0.47
Sox1P53783 Gm5364-201ENSMUST00000216789 889 ntBASIC18■□□□□ 0.47
Sox1P53783 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sox1P53783 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
Sox1P53783 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Sox1P53783 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
Sox1P53783 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Sox1P53783 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Sox1P53783 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Sox1P53783 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox1P53783 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox1P53783 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox1P53783 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Sox1P53783 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.99■□□□□ 0.47
Sox1P53783 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sox1P53783 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sox1P53783 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.99■□□□□ 0.47
Sox1P53783 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox1P53783 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Sox1P53783 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sox1P53783 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.99■□□□□ 0.47
Sox1P53783 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox1P53783 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Sox1P53783 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox1P53783 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox1P53783 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox1P53783 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox1P53783 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Sox1P53783 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.98■□□□□ 0.47
Sox1P53783 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.98■□□□□ 0.47
Sox1P53783 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sox1P53783 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.98■□□□□ 0.47
Sox1P53783 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox1P53783 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox1P53783 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox1P53783 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox1P53783 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Sox1P53783 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox1P53783 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sox1P53783 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox1P53783 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox1P53783 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sox1P53783 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sox1P53783 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox1P53783 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox1P53783 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sox1P53783 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox1P53783 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox1P53783 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sox1P53783 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox1P53783 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.97■□□□□ 0.47
Sox1P53783 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sox1P53783 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox1P53783 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox1P53783 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.97■□□□□ 0.47
Sox1P53783 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox1P53783 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Sox1P53783 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox1P53783 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sox1P53783 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox1P53783 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Sox1P53783 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Sox1P53783 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms