Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx4P53776 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx4P53776 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.93□□□□□ -0.02
Lhx4P53776 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx4P53776 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx4P53776 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.93□□□□□ -0.02
Lhx4P53776 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Lhx4P53776 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Lhx4P53776 Gm12896-201ENSMUST00000118430 226 ntBASIC14.93□□□□□ -0.02
Lhx4P53776 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.93□□□□□ -0.02
Lhx4P53776 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.93□□□□□ -0.02
Lhx4P53776 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.93□□□□□ -0.02
Lhx4P53776 Trmt13-210ENSMUST00000198454 880 ntBASIC14.93□□□□□ -0.02
Lhx4P53776 Gm2559-201ENSMUST00000201323 363 ntBASIC14.93□□□□□ -0.02
Lhx4P53776 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.93□□□□□ -0.02
Lhx4P53776 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.93□□□□□ -0.02
Lhx4P53776 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx4P53776 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Lhx4P53776 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx4P53776 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx4P53776 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx4P53776 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx4P53776 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.93□□□□□ -0.02
Lhx4P53776 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx4P53776 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lhx4P53776 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx4P53776 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.92□□□□□ -0.02
Lhx4P53776 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx4P53776 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Lhx4P53776 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx4P53776 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.92□□□□□ -0.02
Lhx4P53776 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx4P53776 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx4P53776 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx4P53776 Gm37856-201ENSMUST00000191634 999 ntBASIC14.92□□□□□ -0.02
Lhx4P53776 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Lhx4P53776 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx4P53776 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Lhx4P53776 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx4P53776 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx4P53776 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx4P53776 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx4P53776 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx4P53776 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Lhx4P53776 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx4P53776 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.92□□□□□ -0.02
Lhx4P53776 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx4P53776 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx4P53776 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lhx4P53776 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.91□□□□□ -0.02
Lhx4P53776 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.91□□□□□ -0.02
Lhx4P53776 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.91□□□□□ -0.02
Lhx4P53776 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.91□□□□□ -0.02
Lhx4P53776 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lhx4P53776 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lhx4P53776 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lhx4P53776 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lhx4P53776 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.9□□□□□ -0.02
Lhx4P53776 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lhx4P53776 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lhx4P53776 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lhx4P53776 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Lhx4P53776 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lhx4P53776 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lhx4P53776 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Lhx4P53776 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lhx4P53776 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Lhx4P53776 Gm27275-201ENSMUST00000184318 272 ntBASIC14.9□□□□□ -0.02
Lhx4P53776 Gm44549-201ENSMUST00000208351 577 ntBASIC14.9□□□□□ -0.02
Lhx4P53776 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Lhx4P53776 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lhx4P53776 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lhx4P53776 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Lhx4P53776 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lhx4P53776 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Lhx4P53776 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Lhx4P53776 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lhx4P53776 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.89□□□□□ -0.03
Lhx4P53776 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Lhx4P53776 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lhx4P53776 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lhx4P53776 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lhx4P53776 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.89□□□□□ -0.03
Lhx4P53776 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms