Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prox1P48437 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prox1P48437 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Prox1P48437 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.96■□□□□ 0.31
Prox1P48437 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.96■□□□□ 0.31
Prox1P48437 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.96■□□□□ 0.31
Prox1P48437 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prox1P48437 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.96■□□□□ 0.31
Prox1P48437 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prox1P48437 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prox1P48437 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prox1P48437 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prox1P48437 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prox1P48437 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prox1P48437 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Prox1P48437 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Prox1P48437 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Prox1P48437 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prox1P48437 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prox1P48437 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prox1P48437 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prox1P48437 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prox1P48437 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.95■□□□□ 0.3
Prox1P48437 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prox1P48437 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prox1P48437 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prox1P48437 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prox1P48437 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.95■□□□□ 0.3
Prox1P48437 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prox1P48437 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prox1P48437 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prox1P48437 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prox1P48437 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prox1P48437 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prox1P48437 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Prox1P48437 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Prox1P48437 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prox1P48437 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Prox1P48437 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prox1P48437 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Prox1P48437 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prox1P48437 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prox1P48437 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prox1P48437 Haglr-201ENSMUST00000100000 2085 ntBASIC16.93■□□□□ 0.3
Prox1P48437 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prox1P48437 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prox1P48437 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prox1P48437 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prox1P48437 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prox1P48437 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prox1P48437 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.93■□□□□ 0.3
Prox1P48437 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Prox1P48437 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.93■□□□□ 0.3
Prox1P48437 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.93■□□□□ 0.3
Prox1P48437 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.93■□□□□ 0.3
Prox1P48437 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.93■□□□□ 0.3
Prox1P48437 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prox1P48437 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.92■□□□□ 0.3
Prox1P48437 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Prox1P48437 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prox1P48437 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prox1P48437 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Prox1P48437 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Prox1P48437 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Prox1P48437 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prox1P48437 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prox1P48437 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prox1P48437 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prox1P48437 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prox1P48437 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prox1P48437 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.91■□□□□ 0.3
Prox1P48437 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Prox1P48437 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prox1P48437 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.91■□□□□ 0.3
Prox1P48437 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Prox1P48437 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Prox1P48437 Reep4-203ENSMUST00000226563 1444 ntBASIC16.91■□□□□ 0.3
Prox1P48437 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.91■□□□□ 0.3
Prox1P48437 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.91■□□□□ 0.3
Prox1P48437 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.91■□□□□ 0.3
Prox1P48437 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Prox1P48437 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prox1P48437 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prox1P48437 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prox1P48437 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prox1P48437 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prox1P48437 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Prox1P48437 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.91■□□□□ 0.3
Prox1P48437 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Prox1P48437 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Prox1P48437 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.9■□□□□ 0.3
Prox1P48437 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Prox1P48437 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Prox1P48437 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Prox1P48437 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prox1P48437 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prox1P48437 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.9■□□□□ 0.3
Prox1P48437 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prox1P48437 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prox1P48437 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms