Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 AC154266.1-201ENSMUST00000223190 503 ntBASIC11.59□□□□□ -0.55
Xcl1P47993 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Xcl1P47993 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Xcl1P47993 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC11.59□□□□□ -0.55
Xcl1P47993 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Xcl1P47993 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Xcl1P47993 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Xcl1P47993 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC11.59□□□□□ -0.55
Xcl1P47993 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Xcl1P47993 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Xcl1P47993 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Xcl1P47993 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Xcl1P47993 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC11.59□□□□□ -0.55
Xcl1P47993 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Xcl1P47993 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC11.58□□□□□ -0.55
Xcl1P47993 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Xcl1P47993 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Xcl1P47993 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Xcl1P47993 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Xcl1P47993 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Xcl1P47993 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.58□□□□□ -0.56
Xcl1P47993 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Xcl1P47993 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Xcl1P47993 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Xcl1P47993 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Xcl1P47993 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Xcl1P47993 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Xcl1P47993 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC11.58□□□□□ -0.56
Xcl1P47993 AC151971.4-201ENSMUST00000214717 704 ntBASIC11.58□□□□□ -0.56
Xcl1P47993 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Xcl1P47993 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Xcl1P47993 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Xcl1P47993 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.58□□□□□ -0.56
Xcl1P47993 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Xcl1P47993 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Xcl1P47993 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Xcl1P47993 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Xcl1P47993 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Xcl1P47993 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Xcl1P47993 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Xcl1P47993 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Xcl1P47993 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Xcl1P47993 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Xcl1P47993 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Xcl1P47993 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Xcl1P47993 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Xcl1P47993 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Xcl1P47993 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Xcl1P47993 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Xcl1P47993 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC11.57□□□□□ -0.56
Xcl1P47993 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Xcl1P47993 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Xcl1P47993 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Xcl1P47993 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Xcl1P47993 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC11.57□□□□□ -0.56
Xcl1P47993 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Xcl1P47993 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC11.57□□□□□ -0.56
Xcl1P47993 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Xcl1P47993 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Xcl1P47993 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Xcl1P47993 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Xcl1P47993 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Xcl1P47993 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Xcl1P47993 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.56□□□□□ -0.56
Xcl1P47993 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Xcl1P47993 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.56□□□□□ -0.56
Xcl1P47993 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Xcl1P47993 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Xcl1P47993 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Xcl1P47993 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.56□□□□□ -0.56
Xcl1P47993 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Xcl1P47993 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Xcl1P47993 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Xcl1P47993 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Xcl1P47993 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Xcl1P47993 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Xcl1P47993 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Xcl1P47993 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Xcl1P47993 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC11.55□□□□□ -0.56
Xcl1P47993 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Xcl1P47993 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Xcl1P47993 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Xcl1P47993 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms