Protein–RNA interactions for Protein: P39429

Traf2, TNF receptor-associated factor 2, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf2P39429 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Traf2P39429 Gm8520-201ENSMUST00000186517 868 ntBASIC17.77■□□□□ 0.44
Traf2P39429 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.77■□□□□ 0.44
Traf2P39429 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Traf2P39429 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Traf2P39429 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Traf2P39429 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Traf2P39429 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Traf2P39429 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Traf2P39429 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Traf2P39429 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Traf2P39429 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Traf2P39429 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Traf2P39429 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Traf2P39429 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Traf2P39429 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.76■□□□□ 0.43
Traf2P39429 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.76■□□□□ 0.43
Traf2P39429 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.76■□□□□ 0.43
Traf2P39429 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.76■□□□□ 0.43
Traf2P39429 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Traf2P39429 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Traf2P39429 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Traf2P39429 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Traf2P39429 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Traf2P39429 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf2P39429 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf2P39429 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf2P39429 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Traf2P39429 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Traf2P39429 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf2P39429 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf2P39429 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf2P39429 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf2P39429 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.75■□□□□ 0.43
Traf2P39429 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.75■□□□□ 0.43
Traf2P39429 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf2P39429 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Traf2P39429 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Traf2P39429 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf2P39429 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.75■□□□□ 0.43
Traf2P39429 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.75■□□□□ 0.43
Traf2P39429 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf2P39429 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf2P39429 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf2P39429 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf2P39429 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.74■□□□□ 0.43
Traf2P39429 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Traf2P39429 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Traf2P39429 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.74■□□□□ 0.43
Traf2P39429 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.74■□□□□ 0.43
Traf2P39429 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf2P39429 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.74■□□□□ 0.43
Traf2P39429 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.74■□□□□ 0.43
Traf2P39429 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Traf2P39429 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.74■□□□□ 0.43
Traf2P39429 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.74■□□□□ 0.43
Traf2P39429 Gm10698-201ENSMUST00000182663 604 ntBASIC17.74■□□□□ 0.43
Traf2P39429 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf2P39429 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf2P39429 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Traf2P39429 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf2P39429 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Traf2P39429 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf2P39429 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf2P39429 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Traf2P39429 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.73■□□□□ 0.43
Traf2P39429 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf2P39429 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.73■□□□□ 0.43
Traf2P39429 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf2P39429 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Traf2P39429 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Traf2P39429 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Traf2P39429 Mir6349-201ENSMUST00000184059 97 ntBASIC17.73■□□□□ 0.43
Traf2P39429 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.73■□□□□ 0.43
Traf2P39429 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Traf2P39429 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf2P39429 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf2P39429 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf2P39429 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Traf2P39429 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf2P39429 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf2P39429 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf2P39429 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf2P39429 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Traf2P39429 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Traf2P39429 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf2P39429 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Traf2P39429 Gm22240-201ENSMUST00000175225 82 ntBASIC17.72■□□□□ 0.43
Traf2P39429 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Traf2P39429 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.72■□□□□ 0.43
Traf2P39429 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.72■□□□□ 0.43
Traf2P39429 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Traf2P39429 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf2P39429 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf2P39429 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf2P39429 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf2P39429 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Traf2P39429 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.71■□□□□ 0.43
Traf2P39429 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Traf2P39429 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms