Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx3P23198 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx3P23198 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx3P23198 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.08■□□□□ 0.16
Cbx3P23198 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx3P23198 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx3P23198 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx3P23198 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx3P23198 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx3P23198 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx3P23198 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx3P23198 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx3P23198 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx3P23198 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx3P23198 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cbx3P23198 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx3P23198 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.07■□□□□ 0.16
Cbx3P23198 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx3P23198 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx3P23198 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.07■□□□□ 0.16
Cbx3P23198 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx3P23198 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.07■□□□□ 0.16
Cbx3P23198 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx3P23198 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx3P23198 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx3P23198 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cbx3P23198 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx3P23198 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx3P23198 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx3P23198 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx3P23198 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx3P23198 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx3P23198 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx3P23198 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.06■□□□□ 0.16
Cbx3P23198 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx3P23198 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.06■□□□□ 0.16
Cbx3P23198 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx3P23198 Gm45102-201ENSMUST00000207427 857 ntBASIC16.06■□□□□ 0.16
Cbx3P23198 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx3P23198 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
Cbx3P23198 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Cbx3P23198 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx3P23198 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx3P23198 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx3P23198 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx3P23198 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx3P23198 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.06■□□□□ 0.16
Cbx3P23198 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cbx3P23198 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.05■□□□□ 0.16
Cbx3P23198 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Gm14117-201ENSMUST00000122417 843 ntBASIC16.05■□□□□ 0.16
Cbx3P23198 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cbx3P23198 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.05■□□□□ 0.16
Cbx3P23198 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cbx3P23198 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.05■□□□□ 0.16
Cbx3P23198 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cbx3P23198 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Cbx3P23198 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.04■□□□□ 0.16
Cbx3P23198 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cbx3P23198 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Cbx3P23198 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Cbx3P23198 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cbx3P23198 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cbx3P23198 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cbx3P23198 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cbx3P23198 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms